Protein–RNA interactions for Protein: Q8CE50

Snx30, Sorting nexin-30, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx30Q8CE50 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Snx30Q8CE50 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
Snx30Q8CE50 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.41■■□□□ 1.66
Snx30Q8CE50 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Snx30Q8CE50 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Snx30Q8CE50 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Snx30Q8CE50 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Snx30Q8CE50 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Snx30Q8CE50 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Snx30Q8CE50 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Snx30Q8CE50 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Snx30Q8CE50 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Snx30Q8CE50 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.36■■□□□ 1.65
Snx30Q8CE50 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Snx30Q8CE50 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Snx30Q8CE50 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Snx30Q8CE50 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Snx30Q8CE50 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Snx30Q8CE50 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Snx30Q8CE50 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Snx30Q8CE50 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Snx30Q8CE50 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.33■■□□□ 1.65
Snx30Q8CE50 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Snx30Q8CE50 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Snx30Q8CE50 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Snx30Q8CE50 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Snx30Q8CE50 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Snx30Q8CE50 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Snx30Q8CE50 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.27■■□□□ 1.64
Snx30Q8CE50 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Snx30Q8CE50 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Snx30Q8CE50 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Snx30Q8CE50 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Snx30Q8CE50 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.24■■□□□ 1.63
Snx30Q8CE50 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Snx30Q8CE50 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Snx30Q8CE50 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Snx30Q8CE50 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.22■■□□□ 1.63
Snx30Q8CE50 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Snx30Q8CE50 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.21■■□□□ 1.63
Snx30Q8CE50 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Snx30Q8CE50 Gm9397-201ENSMUST00000200125 605 ntBASIC25.21■■□□□ 1.63
Snx30Q8CE50 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.21■■□□□ 1.63
Snx30Q8CE50 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Snx30Q8CE50 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Snx30Q8CE50 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
Snx30Q8CE50 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Snx30Q8CE50 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Snx30Q8CE50 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Snx30Q8CE50 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.17■■□□□ 1.62
Snx30Q8CE50 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Snx30Q8CE50 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Snx30Q8CE50 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Snx30Q8CE50 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.15■■□□□ 1.62
Snx30Q8CE50 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.14■■□□□ 1.62
Snx30Q8CE50 Gm45855-201ENSMUST00000212546 880 ntBASIC25.14■■□□□ 1.62
Snx30Q8CE50 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Snx30Q8CE50 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Snx30Q8CE50 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.13■■□□□ 1.61
Snx30Q8CE50 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Snx30Q8CE50 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Snx30Q8CE50 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Snx30Q8CE50 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Snx30Q8CE50 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Snx30Q8CE50 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.09■■□□□ 1.61
Snx30Q8CE50 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.09■■□□□ 1.61
Snx30Q8CE50 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Snx30Q8CE50 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Snx30Q8CE50 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.07■■□□□ 1.6
Snx30Q8CE50 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.07■■□□□ 1.6
Snx30Q8CE50 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.06■■□□□ 1.6
Snx30Q8CE50 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Snx30Q8CE50 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Snx30Q8CE50 Gm24970-201ENSMUST00000175582 82 ntBASIC25.05■■□□□ 1.6
Snx30Q8CE50 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Snx30Q8CE50 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Snx30Q8CE50 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Snx30Q8CE50 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Snx30Q8CE50 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.04■■□□□ 1.6
Snx30Q8CE50 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.03■■□□□ 1.6
Snx30Q8CE50 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Snx30Q8CE50 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Snx30Q8CE50 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Snx30Q8CE50 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
Snx30Q8CE50 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
Snx30Q8CE50 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Snx30Q8CE50 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25■■□□□ 1.59
Snx30Q8CE50 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25■■□□□ 1.59
Snx30Q8CE50 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25■■□□□ 1.59
Snx30Q8CE50 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25■■□□□ 1.59
Snx30Q8CE50 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Snx30Q8CE50 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Snx30Q8CE50 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Snx30Q8CE50 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Snx30Q8CE50 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Snx30Q8CE50 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Snx30Q8CE50 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.98■■□□□ 1.59
Snx30Q8CE50 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.98■■□□□ 1.59
Snx30Q8CE50 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.97■■□□□ 1.59
Snx30Q8CE50 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.97■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms