Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cfap54Q8C6S9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Cfap54Q8C6S9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cfap54Q8C6S9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.61■■□□□ 1.53
Cfap54Q8C6S9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cfap54Q8C6S9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cfap54Q8C6S9 Gm11175-201ENSMUST00000116172 543 ntBASIC24.6■■□□□ 1.53
Cfap54Q8C6S9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Cfap54Q8C6S9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cfap54Q8C6S9 Gm11599-201ENSMUST00000118720 878 ntBASIC24.59■■□□□ 1.53
Cfap54Q8C6S9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cfap54Q8C6S9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cfap54Q8C6S9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Cfap54Q8C6S9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cfap54Q8C6S9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Cfap54Q8C6S9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.55■■□□□ 1.52
Cfap54Q8C6S9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cfap54Q8C6S9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Cfap54Q8C6S9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cfap54Q8C6S9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
Cfap54Q8C6S9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cfap54Q8C6S9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cfap54Q8C6S9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cfap54Q8C6S9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.52■■□□□ 1.52
Cfap54Q8C6S9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Cfap54Q8C6S9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cfap54Q8C6S9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Cfap54Q8C6S9 Cap2-205ENSMUST00000225824 1634 ntBASIC24.51■■□□□ 1.51
Cfap54Q8C6S9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Cfap54Q8C6S9 Nkain2-201ENSMUST00000092602 558 ntBASIC24.48■■□□□ 1.51
Cfap54Q8C6S9 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.47■■□□□ 1.51
Cfap54Q8C6S9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cfap54Q8C6S9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.47■■□□□ 1.51
Cfap54Q8C6S9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cfap54Q8C6S9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Cfap54Q8C6S9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cfap54Q8C6S9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.45■■□□□ 1.5
Cfap54Q8C6S9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Cfap54Q8C6S9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Cfap54Q8C6S9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Cfap54Q8C6S9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cfap54Q8C6S9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Cfap54Q8C6S9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Cfap54Q8C6S9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cfap54Q8C6S9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cfap54Q8C6S9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cfap54Q8C6S9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.4■■□□□ 1.5
Cfap54Q8C6S9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Cfap54Q8C6S9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cfap54Q8C6S9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cfap54Q8C6S9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cfap54Q8C6S9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cfap54Q8C6S9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Cfap54Q8C6S9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Cfap54Q8C6S9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.35■■□□□ 1.49
Cfap54Q8C6S9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.35■■□□□ 1.49
Cfap54Q8C6S9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
Cfap54Q8C6S9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cfap54Q8C6S9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cfap54Q8C6S9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cfap54Q8C6S9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.32■■□□□ 1.48
Cfap54Q8C6S9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Cfap54Q8C6S9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.3■■□□□ 1.48
Cfap54Q8C6S9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Cfap54Q8C6S9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cfap54Q8C6S9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Cfap54Q8C6S9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Cfap54Q8C6S9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cfap54Q8C6S9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cfap54Q8C6S9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cfap54Q8C6S9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cfap54Q8C6S9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Cfap54Q8C6S9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cfap54Q8C6S9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Cfap54Q8C6S9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
Cfap54Q8C6S9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.24■■□□□ 1.47
Cfap54Q8C6S9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cfap54Q8C6S9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cfap54Q8C6S9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.21■■□□□ 1.47
Cfap54Q8C6S9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Cfap54Q8C6S9 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.2■■□□□ 1.46
Cfap54Q8C6S9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cfap54Q8C6S9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Cfap54Q8C6S9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.19■■□□□ 1.46
Cfap54Q8C6S9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cfap54Q8C6S9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.17■■□□□ 1.46
Cfap54Q8C6S9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cfap54Q8C6S9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.16■■□□□ 1.46
Cfap54Q8C6S9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.15■■□□□ 1.46
Cfap54Q8C6S9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Cfap54Q8C6S9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.14■■□□□ 1.45
Cfap54Q8C6S9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cfap54Q8C6S9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cfap54Q8C6S9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Cfap54Q8C6S9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cfap54Q8C6S9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.12■■□□□ 1.45
Cfap54Q8C6S9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cfap54Q8C6S9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cfap54Q8C6S9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cfap54Q8C6S9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 201.1 ms