Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Ccdc60Q8C4J0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31.9■■■□□ 2.7
Ccdc60Q8C4J0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Ccdc60Q8C4J0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ccdc60Q8C4J0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ccdc60Q8C4J0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ccdc60Q8C4J0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
Ccdc60Q8C4J0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC31.86■■■□□ 2.69
Ccdc60Q8C4J0 Gm45855-201ENSMUST00000212546 880 ntBASIC31.86■■■□□ 2.69
Ccdc60Q8C4J0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ccdc60Q8C4J0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC31.85■■■□□ 2.69
Ccdc60Q8C4J0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ccdc60Q8C4J0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Ccdc60Q8C4J0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ccdc60Q8C4J0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Ccdc60Q8C4J0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC31.81■■■□□ 2.68
Ccdc60Q8C4J0 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.8■■■□□ 2.68
Ccdc60Q8C4J0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ccdc60Q8C4J0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ccdc60Q8C4J0 Gm43445-201ENSMUST00000198564 2091 ntBASIC31.79■■■□□ 2.68
Ccdc60Q8C4J0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Ccdc60Q8C4J0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Ccdc60Q8C4J0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
Ccdc60Q8C4J0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC31.77■■■□□ 2.68
Ccdc60Q8C4J0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Ccdc60Q8C4J0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.68
Ccdc60Q8C4J0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Ccdc60Q8C4J0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Ccdc60Q8C4J0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Ccdc60Q8C4J0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
Ccdc60Q8C4J0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Ccdc60Q8C4J0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ccdc60Q8C4J0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ccdc60Q8C4J0 Gm43863-201ENSMUST00000203822 1192 ntBASIC31.72■■■□□ 2.67
Ccdc60Q8C4J0 Gm24970-201ENSMUST00000175582 82 ntBASIC31.7■■■□□ 2.67
Ccdc60Q8C4J0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC31.69■■■□□ 2.66
Ccdc60Q8C4J0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Ccdc60Q8C4J0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Ccdc60Q8C4J0 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.68■■■□□ 2.66
Ccdc60Q8C4J0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Ccdc60Q8C4J0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC31.67■■■□□ 2.66
Ccdc60Q8C4J0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
Ccdc60Q8C4J0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC31.67■■■□□ 2.66
Ccdc60Q8C4J0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC31.66■■■□□ 2.66
Ccdc60Q8C4J0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Ccdc60Q8C4J0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Ccdc60Q8C4J0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Ccdc60Q8C4J0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC31.65■■■□□ 2.66
Ccdc60Q8C4J0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Ccdc60Q8C4J0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Ccdc60Q8C4J0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Ccdc60Q8C4J0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Ccdc60Q8C4J0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Ccdc60Q8C4J0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
Ccdc60Q8C4J0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.63■■■□□ 2.65
Ccdc60Q8C4J0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31.63■■■□□ 2.65
Ccdc60Q8C4J0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Ccdc60Q8C4J0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC31.62■■■□□ 2.65
Ccdc60Q8C4J0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
Ccdc60Q8C4J0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Ccdc60Q8C4J0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC31.61■■■□□ 2.65
Ccdc60Q8C4J0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC31.61■■■□□ 2.65
Ccdc60Q8C4J0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Ccdc60Q8C4J0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC31.59■■■□□ 2.65
Ccdc60Q8C4J0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Ccdc60Q8C4J0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Ccdc60Q8C4J0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ccdc60Q8C4J0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC31.58■■■□□ 2.65
Ccdc60Q8C4J0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Ccdc60Q8C4J0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ccdc60Q8C4J0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Ccdc60Q8C4J0 AC157572.2-201ENSMUST00000226970 908 ntBASIC31.54■■■□□ 2.64
Ccdc60Q8C4J0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Ccdc60Q8C4J0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Ccdc60Q8C4J0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC31.51■■■□□ 2.64
Ccdc60Q8C4J0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Ccdc60Q8C4J0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Ccdc60Q8C4J0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ccdc60Q8C4J0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ccdc60Q8C4J0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ccdc60Q8C4J0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Ccdc60Q8C4J0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC31.47■■■□□ 2.63
Ccdc60Q8C4J0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC31.46■■■□□ 2.63
Ccdc60Q8C4J0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
Ccdc60Q8C4J0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.45■■■□□ 2.63
Ccdc60Q8C4J0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Ccdc60Q8C4J0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Ccdc60Q8C4J0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ccdc60Q8C4J0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ccdc60Q8C4J0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ccdc60Q8C4J0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ccdc60Q8C4J0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ccdc60Q8C4J0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ccdc60Q8C4J0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Ccdc60Q8C4J0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ccdc60Q8C4J0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ccdc60Q8C4J0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.39■■■□□ 2.62
Ccdc60Q8C4J0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Ccdc60Q8C4J0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ccdc60Q8C4J0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms