Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ptcd1Q8C2E4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
Ptcd1Q8C2E4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Ptcd1Q8C2E4 Nkain2-201ENSMUST00000092602 558 ntBASIC31.01■■■□□ 2.55
Ptcd1Q8C2E4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
Ptcd1Q8C2E4 Gm7432-201ENSMUST00000210343 879 ntBASIC31■■■□□ 2.55
Ptcd1Q8C2E4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
Ptcd1Q8C2E4 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.98■■■□□ 2.55
Ptcd1Q8C2E4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.97■■■□□ 2.55
Ptcd1Q8C2E4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ptcd1Q8C2E4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
Ptcd1Q8C2E4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Ptcd1Q8C2E4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Ptcd1Q8C2E4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Ptcd1Q8C2E4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Ptcd1Q8C2E4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Ptcd1Q8C2E4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.91■■■□□ 2.54
Ptcd1Q8C2E4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Ptcd1Q8C2E4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.88■■■□□ 2.53
Ptcd1Q8C2E4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.87■■■□□ 2.53
Ptcd1Q8C2E4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.87■■■□□ 2.53
Ptcd1Q8C2E4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Ptcd1Q8C2E4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Ptcd1Q8C2E4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Ptcd1Q8C2E4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
Ptcd1Q8C2E4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Ptcd1Q8C2E4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Ptcd1Q8C2E4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ptcd1Q8C2E4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Ptcd1Q8C2E4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.81■■■□□ 2.52
Ptcd1Q8C2E4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
Ptcd1Q8C2E4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ptcd1Q8C2E4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Ptcd1Q8C2E4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Ptcd1Q8C2E4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.79■■■□□ 2.52
Ptcd1Q8C2E4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Ptcd1Q8C2E4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Ptcd1Q8C2E4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ptcd1Q8C2E4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Ptcd1Q8C2E4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Ptcd1Q8C2E4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.75■■■□□ 2.51
Ptcd1Q8C2E4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ptcd1Q8C2E4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ptcd1Q8C2E4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ptcd1Q8C2E4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
Ptcd1Q8C2E4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30.73■■■□□ 2.51
Ptcd1Q8C2E4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ptcd1Q8C2E4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ptcd1Q8C2E4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.73■■■□□ 2.51
Ptcd1Q8C2E4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Ptcd1Q8C2E4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Ptcd1Q8C2E4 Gm11599-201ENSMUST00000118720 878 ntBASIC30.72■■■□□ 2.51
Ptcd1Q8C2E4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ptcd1Q8C2E4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Ptcd1Q8C2E4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.5
Ptcd1Q8C2E4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
Ptcd1Q8C2E4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Ptcd1Q8C2E4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Ptcd1Q8C2E4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ptcd1Q8C2E4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Ptcd1Q8C2E4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ptcd1Q8C2E4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.64■■■□□ 2.5
Ptcd1Q8C2E4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
Ptcd1Q8C2E4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
Ptcd1Q8C2E4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30.63■■■□□ 2.49
Ptcd1Q8C2E4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
Ptcd1Q8C2E4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.62■■■□□ 2.49
Ptcd1Q8C2E4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.62■■■□□ 2.49
Ptcd1Q8C2E4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ptcd1Q8C2E4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ptcd1Q8C2E4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30.61■■■□□ 2.49
Ptcd1Q8C2E4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
Ptcd1Q8C2E4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Ptcd1Q8C2E4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Ptcd1Q8C2E4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Ptcd1Q8C2E4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ptcd1Q8C2E4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Ptcd1Q8C2E4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ptcd1Q8C2E4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Ptcd1Q8C2E4 Mir6538-201ENSMUST00000183713 110 ntBASIC30.55■■■□□ 2.48
Ptcd1Q8C2E4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Ptcd1Q8C2E4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ptcd1Q8C2E4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Ptcd1Q8C2E4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Ptcd1Q8C2E4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Ptcd1Q8C2E4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Ptcd1Q8C2E4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Ptcd1Q8C2E4 Gm11175-201ENSMUST00000116172 543 ntBASIC30.49■■■□□ 2.47
Ptcd1Q8C2E4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ptcd1Q8C2E4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ptcd1Q8C2E4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ptcd1Q8C2E4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Ptcd1Q8C2E4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30.46■■■□□ 2.47
Ptcd1Q8C2E4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Ptcd1Q8C2E4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Ptcd1Q8C2E4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.44■■■□□ 2.46
Ptcd1Q8C2E4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ptcd1Q8C2E4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ptcd1Q8C2E4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Ptcd1Q8C2E4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Retrieved 100 of 76,532 protein–RNA pairs in 9 ms