Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Trim62Q80V85 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Trim62Q80V85 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Trim62Q80V85 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Trim62Q80V85 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trim62Q80V85 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trim62Q80V85 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trim62Q80V85 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Trim62Q80V85 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Trim62Q80V85 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.83■■□□□ 1.72
Trim62Q80V85 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trim62Q80V85 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trim62Q80V85 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Trim62Q80V85 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Trim62Q80V85 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Trim62Q80V85 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.8■■□□□ 1.72
Trim62Q80V85 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.8■■□□□ 1.72
Trim62Q80V85 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim62Q80V85 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim62Q80V85 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Trim62Q80V85 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
Trim62Q80V85 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.78■■□□□ 1.72
Trim62Q80V85 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim62Q80V85 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
Trim62Q80V85 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
Trim62Q80V85 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Trim62Q80V85 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim62Q80V85 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Trim62Q80V85 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
Trim62Q80V85 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim62Q80V85 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.76■■□□□ 1.71
Trim62Q80V85 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Trim62Q80V85 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.74■■□□□ 1.71
Trim62Q80V85 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
Trim62Q80V85 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Trim62Q80V85 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Trim62Q80V85 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Trim62Q80V85 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Trim62Q80V85 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.71■■□□□ 1.71
Trim62Q80V85 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Trim62Q80V85 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Trim62Q80V85 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.69■■□□□ 1.7
Trim62Q80V85 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.69■■□□□ 1.7
Trim62Q80V85 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.68■■□□□ 1.7
Trim62Q80V85 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Trim62Q80V85 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Trim62Q80V85 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Trim62Q80V85 Zxda-201ENSMUST00000117281 2621 ntBASIC25.66■■□□□ 1.7
Trim62Q80V85 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.65■■□□□ 1.7
Trim62Q80V85 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim62Q80V85 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim62Q80V85 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.65■■□□□ 1.7
Trim62Q80V85 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Trim62Q80V85 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.63■■□□□ 1.69
Trim62Q80V85 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Trim62Q80V85 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Trim62Q80V85 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trim62Q80V85 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trim62Q80V85 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Trim62Q80V85 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trim62Q80V85 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trim62Q80V85 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Trim62Q80V85 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim62Q80V85 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.55■■□□□ 1.68
Trim62Q80V85 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim62Q80V85 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim62Q80V85 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.53■■□□□ 1.68
Trim62Q80V85 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Trim62Q80V85 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.51■■□□□ 1.67
Trim62Q80V85 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.5■■□□□ 1.67
Trim62Q80V85 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Trim62Q80V85 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.49■■□□□ 1.67
Trim62Q80V85 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Trim62Q80V85 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim62Q80V85 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim62Q80V85 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
Trim62Q80V85 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Trim62Q80V85 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.46■■□□□ 1.67
Trim62Q80V85 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Trim62Q80V85 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Trim62Q80V85 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.45■■□□□ 1.66
Trim62Q80V85 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.45■■□□□ 1.66
Trim62Q80V85 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Trim62Q80V85 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Trim62Q80V85 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Trim62Q80V85 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trim62Q80V85 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
Trim62Q80V85 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.42■■□□□ 1.66
Trim62Q80V85 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.41■■□□□ 1.66
Trim62Q80V85 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trim62Q80V85 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trim62Q80V85 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.41■■□□□ 1.66
Trim62Q80V85 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.4■■□□□ 1.66
Trim62Q80V85 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Trim62Q80V85 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Trim62Q80V85 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Trim62Q80V85 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Trim62Q80V85 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Trim62Q80V85 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Trim62Q80V85 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.4■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms