Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm25239-201ENSMUST00000174915 86 ntBASIC38.98■■■■□ 3.83
Trim62Q80V85 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
Trim62Q80V85 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
Trim62Q80V85 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
Trim62Q80V85 Gm15042-201ENSMUST00000120212 883 ntBASIC34.48■■■■□ 3.11
Trim62Q80V85 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Trim62Q80V85 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.05■■■■□ 3.04
Trim62Q80V85 Gm15045-201ENSMUST00000117359 883 ntBASIC33.71■■■□□ 2.99
Trim62Q80V85 Gm24109-201ENSMUST00000175489 103 ntBASIC33.56■■■□□ 2.96
Trim62Q80V85 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Trim62Q80V85 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Trim62Q80V85 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
Trim62Q80V85 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Trim62Q80V85 Gm23366-201ENSMUST00000175022 89 ntBASIC32.69■■■□□ 2.82
Trim62Q80V85 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.57■■■□□ 2.81
Trim62Q80V85 Psd-208ENSMUST00000224556 2034 ntBASIC32.48■■■□□ 2.79
Trim62Q80V85 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Trim62Q80V85 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Trim62Q80V85 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Trim62Q80V85 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
Trim62Q80V85 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Trim62Q80V85 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Trim62Q80V85 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.69
Trim62Q80V85 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
Trim62Q80V85 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Trim62Q80V85 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.83■■■□□ 2.69
Trim62Q80V85 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Trim62Q80V85 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
Trim62Q80V85 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Trim62Q80V85 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.6■■■□□ 2.65
Trim62Q80V85 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Trim62Q80V85 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.42■■■□□ 2.62
Trim62Q80V85 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Trim62Q80V85 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Trim62Q80V85 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.01■■■□□ 2.55
Trim62Q80V85 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.92■■■□□ 2.54
Trim62Q80V85 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Trim62Q80V85 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.82■■■□□ 2.52
Trim62Q80V85 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Trim62Q80V85 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Trim62Q80V85 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Trim62Q80V85 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.69■■■□□ 2.5
Trim62Q80V85 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Trim62Q80V85 Gm25238-201ENSMUST00000174914 89 ntBASIC30.6■■■□□ 2.49
Trim62Q80V85 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Trim62Q80V85 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Trim62Q80V85 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.43■■■□□ 2.46
Trim62Q80V85 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Trim62Q80V85 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Trim62Q80V85 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Trim62Q80V85 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Trim62Q80V85 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.3■■■□□ 2.44
Trim62Q80V85 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Trim62Q80V85 Gm27325-201ENSMUST00000175467 74 ntBASIC30.27■■■□□ 2.44
Trim62Q80V85 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.21■■■□□ 2.43
Trim62Q80V85 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
Trim62Q80V85 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Trim62Q80V85 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trim62Q80V85 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Trim62Q80V85 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Trim62Q80V85 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Trim62Q80V85 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.07■■■□□ 2.4
Trim62Q80V85 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Trim62Q80V85 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Trim62Q80V85 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.98■■■□□ 2.39
Trim62Q80V85 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
Trim62Q80V85 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.9■■■□□ 2.38
Trim62Q80V85 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Trim62Q80V85 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Trim62Q80V85 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Trim62Q80V85 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.83■■■□□ 2.37
Trim62Q80V85 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Trim62Q80V85 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.78■■■□□ 2.36
Trim62Q80V85 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Trim62Q80V85 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Trim62Q80V85 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
Trim62Q80V85 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.61■■■□□ 2.33
Trim62Q80V85 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Trim62Q80V85 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.53■■■□□ 2.32
Trim62Q80V85 Rab21-202ENSMUST00000218831 843 ntBASIC29.52■■■□□ 2.32
Trim62Q80V85 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
Trim62Q80V85 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Trim62Q80V85 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Trim62Q80V85 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.38■■■□□ 2.29
Trim62Q80V85 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Trim62Q80V85 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Trim62Q80V85 Gm25262-201ENSMUST00000174934 133 ntBASIC29.24■■■□□ 2.27
Trim62Q80V85 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.2■■■□□ 2.27
Trim62Q80V85 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Trim62Q80V85 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Trim62Q80V85 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.15■■■□□ 2.26
Trim62Q80V85 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
Trim62Q80V85 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Trim62Q80V85 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
Trim62Q80V85 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Trim62Q80V85 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Trim62Q80V85 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Trim62Q80V85 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Trim62Q80V85 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Trim62Q80V85 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.94■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms