Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pif1Q80SX8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pif1Q80SX8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pif1Q80SX8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23■■□□□ 1.27
Pif1Q80SX8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pif1Q80SX8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Pif1Q80SX8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Pif1Q80SX8 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.98■■□□□ 1.27
Pif1Q80SX8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pif1Q80SX8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pif1Q80SX8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pif1Q80SX8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Pif1Q80SX8 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.96■■□□□ 1.27
Pif1Q80SX8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pif1Q80SX8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.96■■□□□ 1.27
Pif1Q80SX8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pif1Q80SX8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Pif1Q80SX8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.95■■□□□ 1.26
Pif1Q80SX8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pif1Q80SX8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pif1Q80SX8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Pif1Q80SX8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Pif1Q80SX8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.93■■□□□ 1.26
Pif1Q80SX8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.92■■□□□ 1.26
Pif1Q80SX8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Pif1Q80SX8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pif1Q80SX8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Pif1Q80SX8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Pif1Q80SX8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.88■■□□□ 1.25
Pif1Q80SX8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.88■■□□□ 1.25
Pif1Q80SX8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pif1Q80SX8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.87■■□□□ 1.25
Pif1Q80SX8 Nkain2-201ENSMUST00000092602 558 ntBASIC22.87■■□□□ 1.25
Pif1Q80SX8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pif1Q80SX8 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.87■■□□□ 1.25
Pif1Q80SX8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pif1Q80SX8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pif1Q80SX8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pif1Q80SX8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Pif1Q80SX8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Pif1Q80SX8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pif1Q80SX8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pif1Q80SX8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Pif1Q80SX8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pif1Q80SX8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pif1Q80SX8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pif1Q80SX8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pif1Q80SX8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.81■■□□□ 1.24
Pif1Q80SX8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pif1Q80SX8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.79■■□□□ 1.24
Pif1Q80SX8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Pif1Q80SX8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pif1Q80SX8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pif1Q80SX8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pif1Q80SX8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pif1Q80SX8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.77■■□□□ 1.24
Pif1Q80SX8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pif1Q80SX8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pif1Q80SX8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pif1Q80SX8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pif1Q80SX8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pif1Q80SX8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pif1Q80SX8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pif1Q80SX8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.74■■□□□ 1.23
Pif1Q80SX8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pif1Q80SX8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.73■■□□□ 1.23
Pif1Q80SX8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.71■■□□□ 1.23
Pif1Q80SX8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Pif1Q80SX8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pif1Q80SX8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pif1Q80SX8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.68■■□□□ 1.22
Pif1Q80SX8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pif1Q80SX8 Gm7432-201ENSMUST00000210343 879 ntBASIC22.68■■□□□ 1.22
Pif1Q80SX8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pif1Q80SX8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Pif1Q80SX8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pif1Q80SX8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pif1Q80SX8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pif1Q80SX8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pif1Q80SX8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.65■■□□□ 1.22
Pif1Q80SX8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pif1Q80SX8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Pif1Q80SX8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pif1Q80SX8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pif1Q80SX8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
Pif1Q80SX8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pif1Q80SX8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pif1Q80SX8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pif1Q80SX8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.59■■□□□ 1.21
Pif1Q80SX8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pif1Q80SX8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.58■■□□□ 1.21
Pif1Q80SX8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pif1Q80SX8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Pif1Q80SX8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pif1Q80SX8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pif1Q80SX8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pif1Q80SX8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
Pif1Q80SX8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pif1Q80SX8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pif1Q80SX8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms