Protein–RNA interactions for Protein: P63013

Prrx1, Paired mesoderm homeobox protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrx1P63013 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prrx1P63013 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Prrx1P63013 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prrx1P63013 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prrx1P63013 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prrx1P63013 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prrx1P63013 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prrx1P63013 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prrx1P63013 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Prrx1P63013 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prrx1P63013 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prrx1P63013 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.26■□□□□ 0.83
Prrx1P63013 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Prrx1P63013 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prrx1P63013 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.25■□□□□ 0.83
Prrx1P63013 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prrx1P63013 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prrx1P63013 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prrx1P63013 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prrx1P63013 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prrx1P63013 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prrx1P63013 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prrx1P63013 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prrx1P63013 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prrx1P63013 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prrx1P63013 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prrx1P63013 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Prrx1P63013 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prrx1P63013 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Prrx1P63013 Gm45855-201ENSMUST00000212546 880 ntBASIC20.2■□□□□ 0.82
Prrx1P63013 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Prrx1P63013 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.2■□□□□ 0.82
Prrx1P63013 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prrx1P63013 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prrx1P63013 Gm9397-201ENSMUST00000200125 605 ntBASIC20.19■□□□□ 0.82
Prrx1P63013 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prrx1P63013 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prrx1P63013 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prrx1P63013 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prrx1P63013 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prrx1P63013 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prrx1P63013 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prrx1P63013 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prrx1P63013 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Prrx1P63013 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Prrx1P63013 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Prrx1P63013 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.13■□□□□ 0.81
Prrx1P63013 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Prrx1P63013 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prrx1P63013 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.12■□□□□ 0.81
Prrx1P63013 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prrx1P63013 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Prrx1P63013 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Prrx1P63013 Gm24970-201ENSMUST00000175582 82 ntBASIC20.1■□□□□ 0.81
Prrx1P63013 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.1■□□□□ 0.81
Prrx1P63013 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prrx1P63013 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.09■□□□□ 0.81
Prrx1P63013 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.09■□□□□ 0.81
Prrx1P63013 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prrx1P63013 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Prrx1P63013 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prrx1P63013 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Prrx1P63013 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.05■□□□□ 0.8
Prrx1P63013 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prrx1P63013 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prrx1P63013 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prrx1P63013 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prrx1P63013 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prrx1P63013 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prrx1P63013 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prrx1P63013 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Prrx1P63013 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Prrx1P63013 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Prrx1P63013 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.02■□□□□ 0.8
Prrx1P63013 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Prrx1P63013 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Prrx1P63013 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prrx1P63013 Gm43445-201ENSMUST00000198564 2091 ntBASIC20■□□□□ 0.79
Prrx1P63013 AC157572.2-201ENSMUST00000226970 908 ntBASIC20■□□□□ 0.79
Prrx1P63013 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20■□□□□ 0.79
Prrx1P63013 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Prrx1P63013 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prrx1P63013 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Prrx1P63013 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prrx1P63013 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prrx1P63013 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.98■□□□□ 0.79
Prrx1P63013 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Prrx1P63013 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.97■□□□□ 0.79
Prrx1P63013 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prrx1P63013 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prrx1P63013 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Prrx1P63013 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prrx1P63013 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.96■□□□□ 0.79
Prrx1P63013 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prrx1P63013 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.95■□□□□ 0.78
Prrx1P63013 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prrx1P63013 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.95■□□□□ 0.78
Prrx1P63013 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prrx1P63013 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prrx1P63013 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms