Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Shmt1P50431 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Shmt1P50431 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Shmt1P50431 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.6■■□□□ 1.85
Shmt1P50431 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Shmt1P50431 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.58■■□□□ 1.85
Shmt1P50431 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Shmt1P50431 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.58■■□□□ 1.85
Shmt1P50431 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Shmt1P50431 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Shmt1P50431 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
Shmt1P50431 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.56■■□□□ 1.84
Shmt1P50431 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Shmt1P50431 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Shmt1P50431 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Shmt1P50431 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Shmt1P50431 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Shmt1P50431 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.54■■□□□ 1.84
Shmt1P50431 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
Shmt1P50431 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Shmt1P50431 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Shmt1P50431 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Shmt1P50431 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Shmt1P50431 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Shmt1P50431 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Shmt1P50431 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Shmt1P50431 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.48■■□□□ 1.83
Shmt1P50431 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Shmt1P50431 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Shmt1P50431 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Shmt1P50431 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Shmt1P50431 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Shmt1P50431 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Shmt1P50431 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Shmt1P50431 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Shmt1P50431 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
Shmt1P50431 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.44■■□□□ 1.82
Shmt1P50431 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Shmt1P50431 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Shmt1P50431 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Shmt1P50431 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Shmt1P50431 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Shmt1P50431 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.39■■□□□ 1.82
Shmt1P50431 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Shmt1P50431 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Shmt1P50431 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Shmt1P50431 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.38■■□□□ 1.81
Shmt1P50431 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Shmt1P50431 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Shmt1P50431 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Shmt1P50431 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Shmt1P50431 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Shmt1P50431 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Shmt1P50431 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Shmt1P50431 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.34■■□□□ 1.81
Shmt1P50431 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Shmt1P50431 Zxda-201ENSMUST00000117281 2621 ntBASIC26.31■■□□□ 1.8
Shmt1P50431 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.3■■□□□ 1.8
Shmt1P50431 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.3■■□□□ 1.8
Shmt1P50431 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Shmt1P50431 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Shmt1P50431 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Shmt1P50431 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
Shmt1P50431 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Shmt1P50431 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.24■■□□□ 1.79
Shmt1P50431 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Shmt1P50431 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Shmt1P50431 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.22■■□□□ 1.79
Shmt1P50431 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.21■■□□□ 1.79
Shmt1P50431 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Shmt1P50431 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Shmt1P50431 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Shmt1P50431 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Shmt1P50431 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Shmt1P50431 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Shmt1P50431 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.18■■□□□ 1.78
Shmt1P50431 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Shmt1P50431 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Shmt1P50431 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Shmt1P50431 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Shmt1P50431 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Shmt1P50431 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Shmt1P50431 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Shmt1P50431 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.15■■□□□ 1.78
Shmt1P50431 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Shmt1P50431 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Shmt1P50431 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
Shmt1P50431 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.14■■□□□ 1.77
Shmt1P50431 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.12■■□□□ 1.77
Shmt1P50431 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.11■■□□□ 1.77
Shmt1P50431 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Shmt1P50431 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Shmt1P50431 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Shmt1P50431 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Shmt1P50431 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.08■■□□□ 1.77
Shmt1P50431 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Shmt1P50431 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Shmt1P50431 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.08■■□□□ 1.77
Shmt1P50431 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Shmt1P50431 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms