Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TgfaP48030 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TgfaP48030 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TgfaP48030 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TgfaP48030 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.02■■□□□ 1.12
TgfaP48030 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TgfaP48030 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TgfaP48030 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22■■□□□ 1.11
TgfaP48030 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TgfaP48030 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TgfaP48030 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
TgfaP48030 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
TgfaP48030 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TgfaP48030 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.98■■□□□ 1.11
TgfaP48030 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TgfaP48030 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
TgfaP48030 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
TgfaP48030 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.97■■□□□ 1.11
TgfaP48030 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TgfaP48030 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
TgfaP48030 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
TgfaP48030 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TgfaP48030 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
TgfaP48030 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TgfaP48030 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TgfaP48030 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TgfaP48030 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TgfaP48030 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TgfaP48030 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TgfaP48030 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TgfaP48030 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TgfaP48030 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.88■■□□□ 1.09
TgfaP48030 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TgfaP48030 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TgfaP48030 Gm11599-201ENSMUST00000118720 878 ntBASIC21.87■■□□□ 1.09
TgfaP48030 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TgfaP48030 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TgfaP48030 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TgfaP48030 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.86■■□□□ 1.09
TgfaP48030 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TgfaP48030 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.85■■□□□ 1.09
TgfaP48030 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TgfaP48030 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TgfaP48030 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TgfaP48030 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TgfaP48030 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.84■■□□□ 1.09
TgfaP48030 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TgfaP48030 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
TgfaP48030 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TgfaP48030 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TgfaP48030 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
TgfaP48030 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TgfaP48030 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TgfaP48030 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.77■■□□□ 1.08
TgfaP48030 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TgfaP48030 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.75■■□□□ 1.07
TgfaP48030 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TgfaP48030 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.75■■□□□ 1.07
TgfaP48030 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TgfaP48030 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TgfaP48030 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TgfaP48030 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TgfaP48030 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
TgfaP48030 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TgfaP48030 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TgfaP48030 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TgfaP48030 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.7■■□□□ 1.06
TgfaP48030 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
TgfaP48030 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TgfaP48030 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TgfaP48030 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TgfaP48030 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TgfaP48030 Mir6538-201ENSMUST00000183713 110 ntBASIC21.66■■□□□ 1.06
TgfaP48030 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TgfaP48030 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TgfaP48030 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TgfaP48030 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.65■■□□□ 1.06
TgfaP48030 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.65■■□□□ 1.06
TgfaP48030 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TgfaP48030 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TgfaP48030 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TgfaP48030 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
TgfaP48030 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TgfaP48030 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TgfaP48030 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
TgfaP48030 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TgfaP48030 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
TgfaP48030 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TgfaP48030 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TgfaP48030 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.61■■□□□ 1.05
TgfaP48030 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TgfaP48030 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TgfaP48030 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.6■■□□□ 1.05
TgfaP48030 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TgfaP48030 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.6■■□□□ 1.05
TgfaP48030 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TgfaP48030 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
TgfaP48030 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TgfaP48030 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TgfaP48030 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms