Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Sox18P43680 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
Sox18P43680 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Sox18P43680 Gm11175-201ENSMUST00000116172 543 ntBASIC24.09■■□□□ 1.45
Sox18P43680 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Sox18P43680 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Sox18P43680 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Sox18P43680 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Sox18P43680 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.07■■□□□ 1.44
Sox18P43680 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Sox18P43680 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Sox18P43680 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.07■■□□□ 1.44
Sox18P43680 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.06■■□□□ 1.44
Sox18P43680 Cap2-205ENSMUST00000225824 1634 ntBASIC24.04■■□□□ 1.44
Sox18P43680 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Sox18P43680 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
Sox18P43680 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sox18P43680 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Sox18P43680 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sox18P43680 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sox18P43680 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.01■■□□□ 1.43
Sox18P43680 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Sox18P43680 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24■■□□□ 1.43
Sox18P43680 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24■■□□□ 1.43
Sox18P43680 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Sox18P43680 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24■■□□□ 1.43
Sox18P43680 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24■■□□□ 1.43
Sox18P43680 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Sox18P43680 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Sox18P43680 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sox18P43680 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Sox18P43680 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Sox18P43680 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Sox18P43680 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Sox18P43680 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Sox18P43680 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Sox18P43680 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Sox18P43680 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.92■■□□□ 1.42
Sox18P43680 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Sox18P43680 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.9■■□□□ 1.42
Sox18P43680 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Sox18P43680 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sox18P43680 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sox18P43680 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sox18P43680 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Sox18P43680 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Sox18P43680 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Sox18P43680 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sox18P43680 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sox18P43680 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.83■■□□□ 1.41
Sox18P43680 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Sox18P43680 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Sox18P43680 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sox18P43680 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sox18P43680 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Sox18P43680 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Sox18P43680 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sox18P43680 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sox18P43680 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sox18P43680 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Sox18P43680 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sox18P43680 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.77■■□□□ 1.4
Sox18P43680 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Sox18P43680 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.77■■□□□ 1.4
Sox18P43680 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Sox18P43680 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Sox18P43680 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
Sox18P43680 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.76■■□□□ 1.39
Sox18P43680 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.76■■□□□ 1.39
Sox18P43680 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Sox18P43680 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sox18P43680 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sox18P43680 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.73■■□□□ 1.39
Sox18P43680 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.73■■□□□ 1.39
Sox18P43680 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sox18P43680 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.72■■□□□ 1.39
Sox18P43680 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Sox18P43680 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sox18P43680 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sox18P43680 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Sox18P43680 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Sox18P43680 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.69■■□□□ 1.38
Sox18P43680 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sox18P43680 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sox18P43680 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Sox18P43680 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.67■■□□□ 1.38
Sox18P43680 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sox18P43680 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.66■■□□□ 1.38
Sox18P43680 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.65■■□□□ 1.38
Sox18P43680 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sox18P43680 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.64■■□□□ 1.37
Sox18P43680 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Sox18P43680 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sox18P43680 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sox18P43680 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Sox18P43680 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Sox18P43680 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sox18P43680 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.6■■□□□ 1.37
Sox18P43680 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sox18P43680 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms