Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Gm10553J3QPF1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm10553J3QPF1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Gm10553J3QPF1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gm10553J3QPF1 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.97■□□□□ 0.63
Gm10553J3QPF1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm10553J3QPF1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm10553J3QPF1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm10553J3QPF1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm10553J3QPF1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm10553J3QPF1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Gm10553J3QPF1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.95■□□□□ 0.62
Gm10553J3QPF1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm10553J3QPF1 Gm24970-201ENSMUST00000175582 82 ntBASIC18.94■□□□□ 0.62
Gm10553J3QPF1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.94■□□□□ 0.62
Gm10553J3QPF1 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.94■□□□□ 0.62
Gm10553J3QPF1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm10553J3QPF1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm10553J3QPF1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.92■□□□□ 0.62
Gm10553J3QPF1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm10553J3QPF1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Gm10553J3QPF1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm10553J3QPF1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Gm10553J3QPF1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm10553J3QPF1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm10553J3QPF1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gm10553J3QPF1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.89■□□□□ 0.61
Gm10553J3QPF1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Gm10553J3QPF1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.88■□□□□ 0.61
Gm10553J3QPF1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.88■□□□□ 0.61
Gm10553J3QPF1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm10553J3QPF1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm10553J3QPF1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.87■□□□□ 0.61
Gm10553J3QPF1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm10553J3QPF1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm10553J3QPF1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm10553J3QPF1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.85■□□□□ 0.61
Gm10553J3QPF1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm10553J3QPF1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm10553J3QPF1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm10553J3QPF1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm10553J3QPF1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Gm10553J3QPF1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm10553J3QPF1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Gm10553J3QPF1 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.83■□□□□ 0.6
Gm10553J3QPF1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm10553J3QPF1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm10553J3QPF1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm10553J3QPF1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm10553J3QPF1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gm10553J3QPF1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm10553J3QPF1 Zxda-201ENSMUST00000117281 2621 ntBASIC18.81■□□□□ 0.6
Gm10553J3QPF1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm10553J3QPF1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm10553J3QPF1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm10553J3QPF1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm10553J3QPF1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.79■□□□□ 0.6
Gm10553J3QPF1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm10553J3QPF1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Gm10553J3QPF1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm10553J3QPF1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.78■□□□□ 0.6
Gm10553J3QPF1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.78■□□□□ 0.6
Gm10553J3QPF1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm10553J3QPF1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm10553J3QPF1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm10553J3QPF1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Gm10553J3QPF1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm10553J3QPF1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm10553J3QPF1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gm10553J3QPF1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm10553J3QPF1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm10553J3QPF1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm10553J3QPF1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm10553J3QPF1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm10553J3QPF1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Gm10553J3QPF1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm10553J3QPF1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.7■□□□□ 0.58
Gm10553J3QPF1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm10553J3QPF1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Gm10553J3QPF1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.69■□□□□ 0.58
Gm10553J3QPF1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.69■□□□□ 0.58
Gm10553J3QPF1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.69■□□□□ 0.58
Gm10553J3QPF1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm10553J3QPF1 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.69■□□□□ 0.58
Gm10553J3QPF1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.68■□□□□ 0.58
Gm10553J3QPF1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm10553J3QPF1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm10553J3QPF1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm10553J3QPF1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.68■□□□□ 0.58
Gm10553J3QPF1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm10553J3QPF1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.68■□□□□ 0.58
Gm10553J3QPF1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm10553J3QPF1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.67■□□□□ 0.58
Gm10553J3QPF1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm10553J3QPF1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm10553J3QPF1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm10553J3QPF1 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.65■□□□□ 0.58
Gm10553J3QPF1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm10553J3QPF1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm10553J3QPF1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms