Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
9930021J03RikH3BKP8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
9930021J03RikH3BKP8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
9930021J03RikH3BKP8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.37■■□□□ 1.33
9930021J03RikH3BKP8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
9930021J03RikH3BKP8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.35■■□□□ 1.33
9930021J03RikH3BKP8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
9930021J03RikH3BKP8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
9930021J03RikH3BKP8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.33■■□□□ 1.33
9930021J03RikH3BKP8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
9930021J03RikH3BKP8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
9930021J03RikH3BKP8 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.33■■□□□ 1.32
9930021J03RikH3BKP8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.32■■□□□ 1.32
9930021J03RikH3BKP8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
9930021J03RikH3BKP8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
9930021J03RikH3BKP8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
9930021J03RikH3BKP8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.29■■□□□ 1.32
9930021J03RikH3BKP8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
9930021J03RikH3BKP8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
9930021J03RikH3BKP8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
9930021J03RikH3BKP8 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.26■■□□□ 1.31
9930021J03RikH3BKP8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
9930021J03RikH3BKP8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
9930021J03RikH3BKP8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.26■■□□□ 1.31
9930021J03RikH3BKP8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.26■■□□□ 1.31
9930021J03RikH3BKP8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.25■■□□□ 1.31
9930021J03RikH3BKP8 Gm24970-201ENSMUST00000175582 82 ntBASIC23.25■■□□□ 1.31
9930021J03RikH3BKP8 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.25■■□□□ 1.31
9930021J03RikH3BKP8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.25■■□□□ 1.31
9930021J03RikH3BKP8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
9930021J03RikH3BKP8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
9930021J03RikH3BKP8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
9930021J03RikH3BKP8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
9930021J03RikH3BKP8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
9930021J03RikH3BKP8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
9930021J03RikH3BKP8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
9930021J03RikH3BKP8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
9930021J03RikH3BKP8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
9930021J03RikH3BKP8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
9930021J03RikH3BKP8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
9930021J03RikH3BKP8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
9930021J03RikH3BKP8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
9930021J03RikH3BKP8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
9930021J03RikH3BKP8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
9930021J03RikH3BKP8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
9930021J03RikH3BKP8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
9930021J03RikH3BKP8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
9930021J03RikH3BKP8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
9930021J03RikH3BKP8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
9930021J03RikH3BKP8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
9930021J03RikH3BKP8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
9930021J03RikH3BKP8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
9930021J03RikH3BKP8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
9930021J03RikH3BKP8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
9930021J03RikH3BKP8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.13■■□□□ 1.29
9930021J03RikH3BKP8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
9930021J03RikH3BKP8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
9930021J03RikH3BKP8 Zxda-201ENSMUST00000117281 2621 ntBASIC23.12■■□□□ 1.29
9930021J03RikH3BKP8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
9930021J03RikH3BKP8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
9930021J03RikH3BKP8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.09■■□□□ 1.29
9930021J03RikH3BKP8 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.09■■□□□ 1.29
9930021J03RikH3BKP8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
9930021J03RikH3BKP8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
9930021J03RikH3BKP8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
9930021J03RikH3BKP8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.07■■□□□ 1.28
9930021J03RikH3BKP8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
9930021J03RikH3BKP8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.07■■□□□ 1.28
9930021J03RikH3BKP8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
9930021J03RikH3BKP8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
9930021J03RikH3BKP8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
9930021J03RikH3BKP8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
9930021J03RikH3BKP8 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.05■■□□□ 1.28
9930021J03RikH3BKP8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
9930021J03RikH3BKP8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
9930021J03RikH3BKP8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
9930021J03RikH3BKP8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
9930021J03RikH3BKP8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
9930021J03RikH3BKP8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.04■■□□□ 1.28
9930021J03RikH3BKP8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
9930021J03RikH3BKP8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.03■■□□□ 1.28
9930021J03RikH3BKP8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
9930021J03RikH3BKP8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
9930021J03RikH3BKP8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
9930021J03RikH3BKP8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.01■■□□□ 1.27
9930021J03RikH3BKP8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.01■■□□□ 1.27
9930021J03RikH3BKP8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
9930021J03RikH3BKP8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
9930021J03RikH3BKP8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
9930021J03RikH3BKP8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
9930021J03RikH3BKP8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
9930021J03RikH3BKP8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
9930021J03RikH3BKP8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
9930021J03RikH3BKP8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.27
9930021J03RikH3BKP8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
9930021J03RikH3BKP8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
9930021J03RikH3BKP8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.95■■□□□ 1.26
9930021J03RikH3BKP8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
9930021J03RikH3BKP8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
9930021J03RikH3BKP8 Amer2-203ENSMUST00000225247 2662 ntBASIC22.95■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms