Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.55■□□□□ 0.88
Trbv26A0A0B4J1P5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trbv26A0A0B4J1P5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trbv26A0A0B4J1P5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trbv26A0A0B4J1P5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trbv26A0A0B4J1P5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trbv26A0A0B4J1P5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.52■□□□□ 0.88
Trbv26A0A0B4J1P5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trbv26A0A0B4J1P5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trbv26A0A0B4J1P5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trbv26A0A0B4J1P5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trbv26A0A0B4J1P5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Trbv26A0A0B4J1P5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.5■□□□□ 0.87
Trbv26A0A0B4J1P5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv26A0A0B4J1P5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv26A0A0B4J1P5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.48■□□□□ 0.87
Trbv26A0A0B4J1P5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbv26A0A0B4J1P5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trbv26A0A0B4J1P5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbv26A0A0B4J1P5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv26A0A0B4J1P5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv26A0A0B4J1P5 Gm24970-201ENSMUST00000175582 82 ntBASIC20.47■□□□□ 0.87
Trbv26A0A0B4J1P5 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.47■□□□□ 0.87
Trbv26A0A0B4J1P5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv26A0A0B4J1P5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv26A0A0B4J1P5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv26A0A0B4J1P5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Trbv26A0A0B4J1P5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv26A0A0B4J1P5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv26A0A0B4J1P5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv26A0A0B4J1P5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.43■□□□□ 0.86
Trbv26A0A0B4J1P5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.43■□□□□ 0.86
Trbv26A0A0B4J1P5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv26A0A0B4J1P5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv26A0A0B4J1P5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv26A0A0B4J1P5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv26A0A0B4J1P5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv26A0A0B4J1P5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Trbv26A0A0B4J1P5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv26A0A0B4J1P5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv26A0A0B4J1P5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trbv26A0A0B4J1P5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Trbv26A0A0B4J1P5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trbv26A0A0B4J1P5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trbv26A0A0B4J1P5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trbv26A0A0B4J1P5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv26A0A0B4J1P5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv26A0A0B4J1P5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Trbv26A0A0B4J1P5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trbv26A0A0B4J1P5 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.36■□□□□ 0.85
Trbv26A0A0B4J1P5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv26A0A0B4J1P5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv26A0A0B4J1P5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trbv26A0A0B4J1P5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv26A0A0B4J1P5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trbv26A0A0B4J1P5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.34■□□□□ 0.85
Trbv26A0A0B4J1P5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trbv26A0A0B4J1P5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv26A0A0B4J1P5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Trbv26A0A0B4J1P5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trbv26A0A0B4J1P5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trbv26A0A0B4J1P5 Zxda-201ENSMUST00000117281 2621 ntBASIC20.32■□□□□ 0.84
Trbv26A0A0B4J1P5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.31■□□□□ 0.84
Trbv26A0A0B4J1P5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.31■□□□□ 0.84
Trbv26A0A0B4J1P5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv26A0A0B4J1P5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv26A0A0B4J1P5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.3■□□□□ 0.84
Trbv26A0A0B4J1P5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.3■□□□□ 0.84
Trbv26A0A0B4J1P5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.3■□□□□ 0.84
Trbv26A0A0B4J1P5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv26A0A0B4J1P5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv26A0A0B4J1P5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv26A0A0B4J1P5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv26A0A0B4J1P5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv26A0A0B4J1P5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trbv26A0A0B4J1P5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv26A0A0B4J1P5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.28■□□□□ 0.84
Trbv26A0A0B4J1P5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.27■□□□□ 0.84
Trbv26A0A0B4J1P5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trbv26A0A0B4J1P5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trbv26A0A0B4J1P5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.23■□□□□ 0.83
Trbv26A0A0B4J1P5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trbv26A0A0B4J1P5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.22■□□□□ 0.83
Trbv26A0A0B4J1P5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trbv26A0A0B4J1P5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trbv26A0A0B4J1P5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.21■□□□□ 0.83
Trbv26A0A0B4J1P5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Trbv26A0A0B4J1P5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.21■□□□□ 0.83
Trbv26A0A0B4J1P5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trbv26A0A0B4J1P5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trbv26A0A0B4J1P5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trbv26A0A0B4J1P5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trbv26A0A0B4J1P5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trbv26A0A0B4J1P5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trbv26A0A0B4J1P5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trbv26A0A0B4J1P5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.18■□□□□ 0.82
Trbv26A0A0B4J1P5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trbv26A0A0B4J1P5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trbv26A0A0B4J1P5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trbv26A0A0B4J1P5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 226.2 ms