Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28778A0A087WSK7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28778A0A087WSK7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28778A0A087WSK7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28778A0A087WSK7 Gm9397-201ENSMUST00000200125 605 ntBASIC20.29■□□□□ 0.84
Gm28778A0A087WSK7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28778A0A087WSK7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Gm28778A0A087WSK7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.28■□□□□ 0.84
Gm28778A0A087WSK7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm28778A0A087WSK7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Gm28778A0A087WSK7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm28778A0A087WSK7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.25■□□□□ 0.83
Gm28778A0A087WSK7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm28778A0A087WSK7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.22■□□□□ 0.83
Gm28778A0A087WSK7 Gm45855-201ENSMUST00000212546 880 ntBASIC20.22■□□□□ 0.83
Gm28778A0A087WSK7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm28778A0A087WSK7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28778A0A087WSK7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28778A0A087WSK7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28778A0A087WSK7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28778A0A087WSK7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm28778A0A087WSK7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm28778A0A087WSK7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm28778A0A087WSK7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm28778A0A087WSK7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Gm28778A0A087WSK7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm28778A0A087WSK7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.18■□□□□ 0.82
Gm28778A0A087WSK7 Gm24970-201ENSMUST00000175582 82 ntBASIC20.18■□□□□ 0.82
Gm28778A0A087WSK7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.18■□□□□ 0.82
Gm28778A0A087WSK7 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.18■□□□□ 0.82
Gm28778A0A087WSK7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm28778A0A087WSK7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Gm28778A0A087WSK7 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.18■□□□□ 0.82
Gm28778A0A087WSK7 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.17■□□□□ 0.82
Gm28778A0A087WSK7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28778A0A087WSK7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28778A0A087WSK7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28778A0A087WSK7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28778A0A087WSK7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28778A0A087WSK7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.15■□□□□ 0.82
Gm28778A0A087WSK7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.15■□□□□ 0.82
Gm28778A0A087WSK7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm28778A0A087WSK7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Gm28778A0A087WSK7 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.12■□□□□ 0.81
Gm28778A0A087WSK7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28778A0A087WSK7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28778A0A087WSK7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Gm28778A0A087WSK7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.11■□□□□ 0.81
Gm28778A0A087WSK7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28778A0A087WSK7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28778A0A087WSK7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.09■□□□□ 0.81
Gm28778A0A087WSK7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Gm28778A0A087WSK7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.09■□□□□ 0.81
Gm28778A0A087WSK7 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.09■□□□□ 0.81
Gm28778A0A087WSK7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28778A0A087WSK7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm28778A0A087WSK7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.08■□□□□ 0.8
Gm28778A0A087WSK7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.08■□□□□ 0.8
Gm28778A0A087WSK7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm28778A0A087WSK7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm28778A0A087WSK7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28778A0A087WSK7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28778A0A087WSK7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28778A0A087WSK7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.06■□□□□ 0.8
Gm28778A0A087WSK7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28778A0A087WSK7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28778A0A087WSK7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28778A0A087WSK7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.05■□□□□ 0.8
Gm28778A0A087WSK7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.05■□□□□ 0.8
Gm28778A0A087WSK7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28778A0A087WSK7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Gm28778A0A087WSK7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.02■□□□□ 0.8
Gm28778A0A087WSK7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm28778A0A087WSK7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28778A0A087WSK7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28778A0A087WSK7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28778A0A087WSK7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm28778A0A087WSK7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Gm28778A0A087WSK7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm28778A0A087WSK7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm28778A0A087WSK7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm28778A0A087WSK7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm28778A0A087WSK7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm28778A0A087WSK7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Gm28778A0A087WSK7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm28778A0A087WSK7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Gm28778A0A087WSK7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm28778A0A087WSK7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Gm28778A0A087WSK7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm28778A0A087WSK7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm28778A0A087WSK7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gm28778A0A087WSK7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm28778A0A087WSK7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm28778A0A087WSK7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.93■□□□□ 0.78
Gm28778A0A087WSK7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm28778A0A087WSK7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gm28778A0A087WSK7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.92■□□□□ 0.78
Gm28778A0A087WSK7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Gm28778A0A087WSK7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm28778A0A087WSK7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms