Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 FIP1YJR093C 984 nt2.51□□□□□ -2.01
SSH1P38353 SMA2YML066C 1110 nt2.51□□□□□ -2.01
SSH1P38353 YOL019W-AYOL019W-A 153 nt2.51□□□□□ -2.01
SSH1P38353 ACM1YPL267W 630 nt2.51□□□□□ -2.01
SSH1P38353 VPS9YML097C 1356 nt2.5□□□□□ -2.01
SSH1P38353 YGR067CYGR067C 2415 nt2.5□□□□□ -2.01
SSH1P38353 SGM1YJR134C 2124 nt2.5□□□□□ -2.01
SSH1P38353 tF(GAA)DtF(GAA)D 73 nt2.5□□□□□ -2.01
SSH1P38353 tF(GAA)NtF(GAA)N 73 nt2.5□□□□□ -2.01
SSH1P38353 YDR491CYDR491C 492 nt2.5□□□□□ -2.01
SSH1P38353 YER066C-AYER066C-A 501 nt2.5□□□□□ -2.01
SSH1P38353 RPS25AYGR027C 327 nt2.5□□□□□ -2.01
SSH1P38353 ATG27YJL178C 816 nt2.5□□□□□ -2.01
SSH1P38353 SAW1YAL027W 786 nt2.5□□□□□ -2.01
SSH1P38353 YLL037WYLL037W 381 nt2.5□□□□□ -2.01
SSH1P38353 YLR042CYLR042C 486 nt2.5□□□□□ -2.01
SSH1P38353 TEM1YML064C 738 nt2.5□□□□□ -2.01
SSH1P38353 YNL171CYNL171C 369 nt2.5□□□□□ -2.01
SSH1P38353 snR11snR11 258 nt2.5□□□□□ -2.01
SSH1P38353 RPL33AYPL143W 324 nt2.5□□□□□ -2.01
SSH1P38353 RIT1YMR283C 1542 nt2.5□□□□□ -2.01
SSH1P38353 PAM1YDR251W 2493 nt2.5□□□□□ -2.01
SSH1P38353 POL3YDL102W 3294 nt2.5□□□□□ -2.01
SSH1P38353 ECM18YDR125C 1362 nt2.49□□□□□ -2.01
SSH1P38353 YDR090CYDR090C 933 nt2.49□□□□□ -2.01
SSH1P38353 YDR336WYDR336W 945 nt2.49□□□□□ -2.01
SSH1P38353 LRS4YDR439W 1044 nt2.49□□□□□ -2.01
SSH1P38353 BRR6YGL247W 594 nt2.49□□□□□ -2.01
SSH1P38353 PRP18YGR006W 756 nt2.49□□□□□ -2.01
SSH1P38353 YGR160WYGR160W 612 nt2.49□□□□□ -2.01
SSH1P38353 MRPL33YMR286W 261 nt2.49□□□□□ -2.01
SSH1P38353 YOR062CYOR062C 807 nt2.49□□□□□ -2.01
SSH1P38353 PKP2YGL059W 1476 nt2.49□□□□□ -2.01
SSH1P38353 SLI1YGR212W 1407 nt2.49□□□□□ -2.01
SSH1P38353 GYP7YDL234C 2241 nt2.49□□□□□ -2.01
SSH1P38353 YME2YMR302C 2553 nt2.49□□□□□ -2.01
SSH1P38353 SPH1YLR313C 1593 nt2.49□□□□□ -2.01
SSH1P38353 ESC1YMR219W 4977 nt2.48□□□□□ -2.01
SSH1P38353 DUN1YDL101C 1542 nt2.48□□□□□ -2.01
SSH1P38353 RRG1YDR065W 1098 nt2.48□□□□□ -2.01
SSH1P38353 YGL041W-AYGL041W-A 465 nt2.48□□□□□ -2.01
SSH1P38353 YGR039WYGR039W 312 nt2.48□□□□□ -2.01
SSH1P38353 ARC19YKL013C 516 nt2.48□□□□□ -2.01
SSH1P38353 YNL184CYNL184C 327 nt2.48□□□□□ -2.01
SSH1P38353 DUG3YNL191W 1074 nt2.48□□□□□ -2.01
SSH1P38353 YOL166CYOL166C 339 nt2.48□□□□□ -2.01
SSH1P38353 PPT2YPL148C 522 nt2.48□□□□□ -2.01
SSH1P38353 POL30YBR088C 777 nt2.48□□□□□ -2.01
SSH1P38353 DIA2YOR080W 2199 nt2.47□□□□□ -2.01
SSH1P38353 CDC20YGL116W 1833 nt2.47□□□□□ -2.01
SSH1P38353 YCR024C-BYCR024C-B 267 nt2.47□□□□□ -2.01
SSH1P38353 ECM11YDR446W 909 nt2.47□□□□□ -2.01
SSH1P38353 AIM11YER093C-A 414 nt2.47□□□□□ -2.01
SSH1P38353 RPL23BYER117W 414 nt2.47□□□□□ -2.01
SSH1P38353 PEF1YGR058W 1008 nt2.47□□□□□ -2.01
SSH1P38353 YKR033CYKR033C 426 nt2.47□□□□□ -2.01
SSH1P38353 RPL19BYBL027W 570 nt2.47□□□□□ -2.01
SSH1P38353 YNL109WYNL109W 546 nt2.47□□□□□ -2.01
SSH1P38353 FIG1YBR040W 897 nt2.47□□□□□ -2.01
SSH1P38353 NSA1YGL111W 1392 nt2.47□□□□□ -2.01
SSH1P38353 TOP2YNL088W 4287 nt2.47□□□□□ -2.01
SSH1P38353 VHR2YER064C 1518 nt2.47□□□□□ -2.01
SSH1P38353 CYR1YJL005W 6081 nt2.47□□□□□ -2.01
SSH1P38353 TPO5YKL174C 1857 nt2.46□□□□□ -2.02
SSH1P38353 RPB9YGL070C 369 nt2.46□□□□□ -2.02
SSH1P38353 YGL138CYGL138C 1038 nt2.46□□□□□ -2.02
SSH1P38353 EFG1YGR271C-A 702 nt2.46□□□□□ -2.02
SSH1P38353 TDA8YAL064C-A 381 nt2.46□□□□□ -2.02
SSH1P38353 YLL047WYLL047W 384 nt2.46□□□□□ -2.02
SSH1P38353 GAB1YLR459W 1185 nt2.46□□□□□ -2.02
SSH1P38353 YNL234WYNL234W 1281 nt2.46□□□□□ -2.02
SSH1P38353 MCA1YOR197W 1299 nt2.46□□□□□ -2.02
SSH1P38353 SUT2YPR009W 807 nt2.46□□□□□ -2.02
SSH1P38353 PFF1YBR074W 2931 nt2.46□□□□□ -2.02
SSH1P38353 YLR001CYLR001C 2589 nt2.46□□□□□ -2.02
SSH1P38353 YKU80YMR106C 1890 nt2.45□□□□□ -2.02
SSH1P38353 MED1YPR070W 1701 nt2.45□□□□□ -2.02
SSH1P38353 SAK1YER129W 3429 nt2.45□□□□□ -2.02
SSH1P38353 SMY2YBR172C 2223 nt2.45□□□□□ -2.02
SSH1P38353 PET100YDR079W 336 nt2.45□□□□□ -2.02
SSH1P38353 YFR010W-AYFR010W-A 189 nt2.45□□□□□ -2.02
SSH1P38353 YMR316C-AYMR316C-A 312 nt2.45□□□□□ -2.02
SSH1P38353 RIM13YMR154C 2184 nt2.44□□□□□ -2.02
SSH1P38353 SAD1YFR005C 1347 nt2.44□□□□□ -2.02
SSH1P38353 YCK2YNL154C 1641 nt2.44□□□□□ -2.02
SSH1P38353 PPE1YHR075C 1203 nt2.44□□□□□ -2.02
SSH1P38353 YIL174WYIL174W 228 nt2.44□□□□□ -2.02
SSH1P38353 SYS1YJL004C 612 nt2.44□□□□□ -2.02
SSH1P38353 YJL222W-AYJL222W-A 228 nt2.44□□□□□ -2.02
SSH1P38353 YLR412C-AYLR412C-A 207 nt2.44□□□□□ -2.02
SSH1P38353 ECM13YBL043W 774 nt2.44□□□□□ -2.02
SSH1P38353 IZH4YOL101C 939 nt2.44□□□□□ -2.02
SSH1P38353 PRM4YPL156C 855 nt2.44□□□□□ -2.02
SSH1P38353 RGR1YLR071C 3249 nt2.44□□□□□ -2.02
SSH1P38353 ENP2YGR145W 2124 nt2.44□□□□□ -2.02
SSH1P38353 MET5YJR137C 4329 nt2.44□□□□□ -2.02
SSH1P38353 YOR296WYOR296W 3870 nt2.43□□□□□ -2.02
SSH1P38353 SST2YLR452C 2097 nt2.43□□□□□ -2.02
SSH1P38353 SIR3YLR442C 2937 nt2.43□□□□□ -2.02
SSH1P38353 YIL082W-AYIL082W-A 4497 nt2.43□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 88 ms