Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 EPL1YFL024C 2499 nt2.56□□□□□ -2
CUE1P38428 PSK1YAL017W 4071 nt2.55□□□□□ -2
CUE1P38428 ERP3YDL018C 678 nt2.55□□□□□ -2
CUE1P38428 YDL026WYDL026W 312 nt2.55□□□□□ -2
CUE1P38428 YDL186WYDL186W 834 nt2.55□□□□□ -2
CUE1P38428 RRG1YDR065W 1098 nt2.55□□□□□ -2
CUE1P38428 GCD6YDR211W 2139 nt2.55□□□□□ -2
CUE1P38428 RNH202YDR279W 1053 nt2.55□□□□□ -2
CUE1P38428 RTT105YER104W 627 nt2.55□□□□□ -2
CUE1P38428 YFL051CYFL051C 483 nt2.55□□□□□ -2
CUE1P38428 THP2YHR167W 786 nt2.55□□□□□ -2
CUE1P38428 RPL15AYLR029C 615 nt2.55□□□□□ -2
CUE1P38428 YLR230WYLR230W 306 nt2.55□□□□□ -2
CUE1P38428 DIM1YPL266W 957 nt2.55□□□□□ -2
CUE1P38428 snR34snR34 203 nt2.55□□□□□ -2
CUE1P38428 RIF1YBR275C 5751 nt2.55□□□□□ -2
CUE1P38428 SWC4YGR002C 1431 nt2.54□□□□□ -2
CUE1P38428 ECM11YDR446W 909 nt2.54□□□□□ -2
CUE1P38428 APA2YDR530C 978 nt2.54□□□□□ -2
CUE1P38428 YDR535CYDR535C 501 nt2.54□□□□□ -2
CUE1P38428 YGL138CYGL138C 1038 nt2.54□□□□□ -2
CUE1P38428 YHR086W-AYHR086W-A 162 nt2.54□□□□□ -2
CUE1P38428 ESL1YIL151C 3357 nt2.54□□□□□ -2
CUE1P38428 SRB8YCR081W 4284 nt2.54□□□□□ -2
CUE1P38428 21S_rRNA21S_rRNA 3296 nt2.53□□□□□ -2
CUE1P38428 NTO1YPR031W 2247 nt2.53□□□□□ -2
CUE1P38428 DRS2YAL026C 4068 nt2.53□□□□□ -2
CUE1P38428 YHL045WYHL045W 348 nt2.53□□□□□ -2
CUE1P38428 PCL7YIL050W 858 nt2.53□□□□□ -2
CUE1P38428 CPR7YJR032W 1182 nt2.53□□□□□ -2
CUE1P38428 TFA2YKR062W 987 nt2.53□□□□□ -2
CUE1P38428 SFH1YLR321C 1281 nt2.53□□□□□ -2
CUE1P38428 YPL071CYPL071C 471 nt2.53□□□□□ -2
CUE1P38428 PPT2YPL148C 522 nt2.53□□□□□ -2
CUE1P38428 YPR142CYPR142C 564 nt2.53□□□□□ -2
CUE1P38428 YKL100CYKL100C 1764 nt2.53□□□□□ -2
CUE1P38428 MDM1YML104C 3384 nt2.53□□□□□ -2
CUE1P38428 FAA2YER015W 2235 nt2.53□□□□□ -2
CUE1P38428 JSN1YJR091C 3276 nt2.53□□□□□ -2
CUE1P38428 RGR1YLR071C 3249 nt2.53□□□□□ -2.01
CUE1P38428 FRE2YKL220C 2136 nt2.53□□□□□ -2.01
CUE1P38428 CHO2YGR157W 2610 nt2.53□□□□□ -2.01
CUE1P38428 VHR2YER064C 1518 nt2.52□□□□□ -2.01
CUE1P38428 NMD2YHR077C 3270 nt2.52□□□□□ -2.01
CUE1P38428 CYR1YJL005W 6081 nt2.52□□□□□ -2.01
CUE1P38428 YDL241WYDL241W 372 nt2.52□□□□□ -2.01
CUE1P38428 MPC3YGR243W 441 nt2.52□□□□□ -2.01
CUE1P38428 DAD2YKR083C 402 nt2.52□□□□□ -2.01
CUE1P38428 YLR297WYLR297W 390 nt2.52□□□□□ -2.01
CUE1P38428 YNL043CYNL043C 321 nt2.52□□□□□ -2.01
CUE1P38428 PMR1YGL167C 2853 nt2.52□□□□□ -2.01
CUE1P38428 RSN1YMR266W 2862 nt2.52□□□□□ -2.01
CUE1P38428 CBP2YHL038C 1893 nt2.52□□□□□ -2.01
CUE1P38428 ENP2YGR145W 2124 nt2.51□□□□□ -2.01
CUE1P38428 YAT2YER024W 2772 nt2.51□□□□□ -2.01
CUE1P38428 TFC4YGR047C 3078 nt2.51□□□□□ -2.01
CUE1P38428 HEH2YDR458C 1992 nt2.51□□□□□ -2.01
CUE1P38428 PSY2YNL201C 2577 nt2.51□□□□□ -2.01
CUE1P38428 YGL006W-AYGL006W-A 111 nt2.51□□□□□ -2.01
CUE1P38428 RPS25AYGR027C 327 nt2.51□□□□□ -2.01
CUE1P38428 YGR107WYGR107W 450 nt2.51□□□□□ -2.01
CUE1P38428 MRPL9YGR220C 810 nt2.51□□□□□ -2.01
CUE1P38428 BAT1YHR208W 1182 nt2.51□□□□□ -2.01
CUE1P38428 DAL2YIR029W 1032 nt2.51□□□□□ -2.01
CUE1P38428 MTD1YKR080W 963 nt2.51□□□□□ -2.01
CUE1P38428 YLR400WYLR400W 474 nt2.51□□□□□ -2.01
CUE1P38428 VMA6YLR447C 1038 nt2.51□□□□□ -2.01
CUE1P38428 MRPL16YBL038W 699 nt2.51□□□□□ -2.01
CUE1P38428 ATP11YNL315C 957 nt2.51□□□□□ -2.01
CUE1P38428 MPD2YOL088C 834 nt2.51□□□□□ -2.01
CUE1P38428 YOR020W-AYOR020W-A 273 nt2.51□□□□□ -2.01
CUE1P38428 SSP2YOR242C 1116 nt2.51□□□□□ -2.01
CUE1P38428 FIG1YBR040W 897 nt2.51□□□□□ -2.01
CUE1P38428 YPL107WYPL107W 747 nt2.51□□□□□ -2.01
CUE1P38428 SWD3YBR175W 948 nt2.51□□□□□ -2.01
CUE1P38428 ATG13YPR185W 2217 nt2.51□□□□□ -2.01
CUE1P38428 EAP1YKL204W 1899 nt2.51□□□□□ -2.01
CUE1P38428 BEM4YPL161C 1902 nt2.5□□□□□ -2.01
CUE1P38428 YCK2YNL154C 1641 nt2.5□□□□□ -2.01
CUE1P38428 SAP1YER047C 2694 nt2.5□□□□□ -2.01
CUE1P38428 COM2YER130C 1332 nt2.5□□□□□ -2.01
CUE1P38428 CDC20YGL116W 1833 nt2.5□□□□□ -2.01
CUE1P38428 CEP3YMR168C 1827 nt2.5□□□□□ -2.01
CUE1P38428 FIN1YDR130C 876 nt2.5□□□□□ -2.01
CUE1P38428 PNC1YGL037C 651 nt2.5□□□□□ -2.01
CUE1P38428 SOL3YHR163W 750 nt2.5□□□□□ -2.01
CUE1P38428 PPX1YHR201C 1194 nt2.5□□□□□ -2.01
CUE1P38428 SPO20YMR017W 1194 nt2.5□□□□□ -2.01
CUE1P38428 YPR203WYPR203W 309 nt2.5□□□□□ -2.01
CUE1P38428 TIM12YBR091C 330 nt2.5□□□□□ -2.01
CUE1P38428 GEA1YJR031C 4227 nt2.5□□□□□ -2.01
CUE1P38428 SKO1YNL167C 1944 nt2.5□□□□□ -2.01
CUE1P38428 MMS1YPR164W 4224 nt2.5□□□□□ -2.01
CUE1P38428 ERG11YHR007C 1593 nt2.49□□□□□ -2.01
CUE1P38428 tF(GAA)DtF(GAA)D 73 nt2.49□□□□□ -2.01
CUE1P38428 tF(GAA)NtF(GAA)N 73 nt2.49□□□□□ -2.01
CUE1P38428 YFR010W-AYFR010W-A 189 nt2.49□□□□□ -2.01
CUE1P38428 YIL054WYIL054W 318 nt2.49□□□□□ -2.01
CUE1P38428 POP8YBL018C 402 nt2.49□□□□□ -2.01
CUE1P38428 YBL039W-BYBL039W-B 180 nt2.49□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms