Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TMEM56-RWDD3S4R434 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM56-RWDD3S4R434 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM56-RWDD3S4R434 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM56-RWDD3S4R434 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM56-RWDD3S4R434 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 Z92544.1-202ENST00000571933 1220 ntBASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TMEM56-RWDD3S4R434 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.36■□□□□ 0.37
TMEM56-RWDD3S4R434 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM56-RWDD3S4R434 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM56-RWDD3S4R434 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TMEM56-RWDD3S4R434 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM56-RWDD3S4R434 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TMEM56-RWDD3S4R434 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM56-RWDD3S4R434 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM56-RWDD3S4R434 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM56-RWDD3S4R434 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM56-RWDD3S4R434 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM56-RWDD3S4R434 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM56-RWDD3S4R434 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 KRT125P-201ENST00000546827 989 ntBASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 GABARAPL3-202ENST00000624044 1851 ntBASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEM56-RWDD3S4R434 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM56-RWDD3S4R434 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM56-RWDD3S4R434 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM56-RWDD3S4R434 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM56-RWDD3S4R434 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM56-RWDD3S4R434 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.34■□□□□ 0.37
TMEM56-RWDD3S4R434 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM56-RWDD3S4R434 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TMEM56-RWDD3S4R434 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM56-RWDD3S4R434 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM56-RWDD3S4R434 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM56-RWDD3S4R434 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM56-RWDD3S4R434 AC010997.5-201ENST00000609182 354 ntBASIC17.34■□□□□ 0.37
TMEM56-RWDD3S4R434 AL117332.1-201ENST00000622628 974 ntBASIC17.34■□□□□ 0.37
TMEM56-RWDD3S4R434 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms