Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 PPX1YHR201C 1194 nt4.25□□□□□ -1.73
SSM4P40318 TRM112YNR046W 408 nt4.25□□□□□ -1.73
SSM4P40318 YIL169CYIL169C 2988 nt4.25□□□□□ -1.73
SSM4P40318 ULP1YPL020C 1866 nt4.25□□□□□ -1.73
SSM4P40318 PBI1YPL272C 1554 nt4.25□□□□□ -1.73
SSM4P40318 RPS18AYDR450W 441 nt4.24□□□□□ -1.73
SSM4P40318 YDR535CYDR535C 501 nt4.24□□□□□ -1.73
SSM4P40318 CAP2YIL034C 864 nt4.24□□□□□ -1.73
SSM4P40318 RPL17AYKL180W 555 nt4.24□□□□□ -1.73
SSM4P40318 YAL064WYAL064W 285 nt4.24□□□□□ -1.73
SSM4P40318 YNL226WYNL226W 411 nt4.24□□□□□ -1.73
SSM4P40318 IDH2YOR136W 1110 nt4.24□□□□□ -1.73
SSM4P40318 YPR148CYPR148C 1308 nt4.24□□□□□ -1.73
SSM4P40318 DSS1YMR287C 2910 nt4.24□□□□□ -1.73
SSM4P40318 ROG1YGL144C 2058 nt4.24□□□□□ -1.73
SSM4P40318 YIG1YPL201C 1386 nt4.24□□□□□ -1.73
SSM4P40318 MAK11YKL021C 1407 nt4.24□□□□□ -1.73
SSM4P40318 RPL23BYER117W 414 nt4.23□□□□□ -1.73
SSM4P40318 YFL065CYFL065C 309 nt4.23□□□□□ -1.73
SSM4P40318 GEP7YGL057C 864 nt4.23□□□□□ -1.73
SSM4P40318 YGR018CYGR018C 330 nt4.23□□□□□ -1.73
SSM4P40318 DDP1YOR163W 567 nt4.23□□□□□ -1.73
SSM4P40318 YGR027W-BYGR027W-B 5268 nt4.23□□□□□ -1.73
SSM4P40318 YLR227W-BYLR227W-B 5268 nt4.23□□□□□ -1.73
SSM4P40318 YPR158C-DYPR158C-D 5268 nt4.23□□□□□ -1.73
SSM4P40318 YGL138CYGL138C 1038 nt4.22□□□□□ -1.73
SSM4P40318 PEX14YGL153W 1026 nt4.22□□□□□ -1.73
SSM4P40318 YGR111WYGR111W 1203 nt4.22□□□□□ -1.73
SSM4P40318 CMC1YKL137W 336 nt4.22□□□□□ -1.73
SSM4P40318 DIA1YMR316W 1011 nt4.22□□□□□ -1.73
SSM4P40318 YBL062WYBL062W 381 nt4.22□□□□□ -1.73
SSM4P40318 RUF5-1RUF5-1 710 nt4.22□□□□□ -1.73
SSM4P40318 RUF5-2RUF5-2 710 nt4.22□□□□□ -1.73
SSM4P40318 TYE7YOR344C 876 nt4.22□□□□□ -1.73
SSM4P40318 YPL109CYPL109C 1974 nt4.22□□□□□ -1.73
SSM4P40318 ILS1YBL076C 3219 nt4.22□□□□□ -1.73
SSM4P40318 TSC13YDL015C 933 nt4.21□□□□□ -1.73
SSM4P40318 SNU23YDL098C 585 nt4.21□□□□□ -1.73
SSM4P40318 PSF2YJL072C 642 nt4.21□□□□□ -1.73
SSM4P40318 YMR310CYMR310C 954 nt4.21□□□□□ -1.73
SSM4P40318 YNL319WYNL319W 441 nt4.21□□□□□ -1.73
SSM4P40318 TPK2YPL203W 1143 nt4.21□□□□□ -1.73
SSM4P40318 ERV15YBR210W 429 nt4.21□□□□□ -1.73
SSM4P40318 ART10YLR392C 1557 nt4.21□□□□□ -1.73
SSM4P40318 NUP159YIL115C 4383 nt4.21□□□□□ -1.74
SSM4P40318 SKP2YNL311C 2292 nt4.21□□□□□ -1.74
SSM4P40318 GCD6YDR211W 2139 nt4.21□□□□□ -1.74
SSM4P40318 ORC4YPR162C 1590 nt4.21□□□□□ -1.74
SSM4P40318 MSS4YDR208W 2340 nt4.21□□□□□ -1.74
SSM4P40318 BMH2YDR099W 822 nt4.21□□□□□ -1.74
SSM4P40318 CSM3YMR048W 954 nt4.21□□□□□ -1.74
SSM4P40318 HNT3YOR258W 654 nt4.21□□□□□ -1.74
SSM4P40318 BTS1YPL069C 1008 nt4.21□□□□□ -1.74
SSM4P40318 DIM1YPL266W 957 nt4.21□□□□□ -1.74
SSM4P40318 snR44snR44 211 nt4.21□□□□□ -1.74
SSM4P40318 YJR061WYJR061W 2808 nt4.2□□□□□ -1.74
SSM4P40318 SST2YLR452C 2097 nt4.2□□□□□ -1.74
SSM4P40318 GCD1YOR260W 1737 nt4.2□□□□□ -1.74
SSM4P40318 ECM18YDR125C 1362 nt4.2□□□□□ -1.74
SSM4P40318 YDR250CYDR250C 276 nt4.2□□□□□ -1.74
SSM4P40318 YDR464C-AYDR464C-A 189 nt4.2□□□□□ -1.74
SSM4P40318 RTA1YGR213C 954 nt4.2□□□□□ -1.74
SSM4P40318 YHL005CYHL005C 393 nt4.2□□□□□ -1.74
SSM4P40318 ATG27YJL178C 816 nt4.2□□□□□ -1.74
SSM4P40318 POL32YJR043C 1053 nt4.2□□□□□ -1.74
SSM4P40318 COX14YML129C 213 nt4.2□□□□□ -1.74
SSM4P40318 YMR099CYMR099C 894 nt4.2□□□□□ -1.74
SSM4P40318 PIN3YPR154W 648 nt4.2□□□□□ -1.74
SSM4P40318 BCS1YDR375C 1371 nt4.19□□□□□ -1.74
SSM4P40318 GYP6YJL044C 1377 nt4.19□□□□□ -1.74
SSM4P40318 YGR117CYGR117C 1431 nt4.19□□□□□ -1.74
SSM4P40318 CUE3YGL110C 1875 nt4.19□□□□□ -1.74
SSM4P40318 ISW2YOR304W 3363 nt4.19□□□□□ -1.74
SSM4P40318 SLS1YLR139C 1932 nt4.19□□□□□ -1.74
SSM4P40318 YGL082WYGL082W 1146 nt4.19□□□□□ -1.74
SSM4P40318 YGR190CYGR190C 366 nt4.19□□□□□ -1.74
SSM4P40318 SEC28YIL076W 891 nt4.19□□□□□ -1.74
SSM4P40318 UBC12YLR306W 567 nt4.19□□□□□ -1.74
SSM4P40318 SFH1YLR321C 1281 nt4.19□□□□□ -1.74
SSM4P40318 YOR097CYOR097C 528 nt4.19□□□□□ -1.74
SSM4P40318 ALG1YBR110W 1350 nt4.18□□□□□ -1.74
SSM4P40318 YDR131CYDR131C 1671 nt4.18□□□□□ -1.74
SSM4P40318 ACK1YDL203C 1872 nt4.18□□□□□ -1.74
SSM4P40318 RGC1YPR115W 3252 nt4.18□□□□□ -1.74
SSM4P40318 WBP1YEL002C 1293 nt4.18□□□□□ -1.74
SSM4P40318 MRPL49YJL096W 486 nt4.18□□□□□ -1.74
SSM4P40318 YAL066WYAL066W 309 nt4.18□□□□□ -1.74
SSM4P40318 SAM37YMR060C 984 nt4.18□□□□□ -1.74
SSM4P40318 YOR082CYOR082C 342 nt4.18□□□□□ -1.74
SSM4P40318 RPB8YOR224C 441 nt4.18□□□□□ -1.74
SSM4P40318 RPS10AYOR293W 318 nt4.18□□□□□ -1.74
SSM4P40318 HSE1YHL002W 1359 nt4.18□□□□□ -1.74
SSM4P40318 FUN12YAL035W 3009 nt4.17□□□□□ -1.74
SSM4P40318 DAP2YHR028C 2457 nt4.17□□□□□ -1.74
SSM4P40318 ERG25YGR060W 930 nt4.17□□□□□ -1.74
SSM4P40318 YKR070WYKR070W 1059 nt4.17□□□□□ -1.74
SSM4P40318 GPN3YLR243W 819 nt4.17□□□□□ -1.74
SSM4P40318 YLR366WYLR366W 306 nt4.17□□□□□ -1.74
SSM4P40318 YPR050CYPR050C 414 nt4.17□□□□□ -1.74
SSM4P40318 UTP25YIL091C 2166 nt4.16□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 43.9 ms