Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.63■■□□□ 1.37
COL1A2P08123 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL1A2P08123 MIR663A-201ENST00000385250 93 ntBASIC23.63■■□□□ 1.37
COL1A2P08123 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL1A2P08123 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.63■■□□□ 1.37
COL1A2P08123 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.63■■□□□ 1.37
COL1A2P08123 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL1A2P08123 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL1A2P08123 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.63■■□□□ 1.37
COL1A2P08123 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL1A2P08123 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL1A2P08123 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL1A2P08123 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL1A2P08123 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.62■■□□□ 1.37
COL1A2P08123 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL1A2P08123 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL1A2P08123 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.62■■□□□ 1.37
COL1A2P08123 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL1A2P08123 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL1A2P08123 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
COL1A2P08123 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.62■■□□□ 1.37
COL1A2P08123 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.62■■□□□ 1.37
COL1A2P08123 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL1A2P08123 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.62■■□□□ 1.37
COL1A2P08123 SLC7A5P1-201ENST00000568957 537 ntBASIC23.62■■□□□ 1.37
COL1A2P08123 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.62■■□□□ 1.37
COL1A2P08123 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.62■■□□□ 1.37
COL1A2P08123 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL1A2P08123 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL1A2P08123 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL1A2P08123 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.61■■□□□ 1.37
COL1A2P08123 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
COL1A2P08123 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL1A2P08123 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL1A2P08123 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL1A2P08123 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL1A2P08123 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.61■■□□□ 1.37
COL1A2P08123 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.61■■□□□ 1.37
COL1A2P08123 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
COL1A2P08123 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL1A2P08123 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.61■■□□□ 1.37
COL1A2P08123 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL1A2P08123 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
COL1A2P08123 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.61■■□□□ 1.37
COL1A2P08123 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.61■■□□□ 1.37
COL1A2P08123 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL1A2P08123 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL1A2P08123 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.61■■□□□ 1.37
COL1A2P08123 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
COL1A2P08123 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.6■■□□□ 1.37
COL1A2P08123 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
COL1A2P08123 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.6■■□□□ 1.37
COL1A2P08123 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
COL1A2P08123 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL1A2P08123 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL1A2P08123 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL1A2P08123 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.6■■□□□ 1.37
COL1A2P08123 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
COL1A2P08123 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.6■■□□□ 1.37
COL1A2P08123 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL1A2P08123 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL1A2P08123 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.6■■□□□ 1.37
COL1A2P08123 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.6■■□□□ 1.37
COL1A2P08123 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.59■■□□□ 1.37
COL1A2P08123 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL1A2P08123 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL1A2P08123 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL1A2P08123 NCF1B-203ENST00000435988 1254 ntBASIC23.59■■□□□ 1.37
COL1A2P08123 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.59■■□□□ 1.37
COL1A2P08123 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.59■■□□□ 1.37
COL1A2P08123 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
COL1A2P08123 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
COL1A2P08123 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL1A2P08123 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
COL1A2P08123 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.59■■□□□ 1.37
COL1A2P08123 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL1A2P08123 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL1A2P08123 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.59■■□□□ 1.37
COL1A2P08123 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL1A2P08123 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL1A2P08123 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
COL1A2P08123 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.58■■□□□ 1.37
COL1A2P08123 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL1A2P08123 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL1A2P08123 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.58■■□□□ 1.37
COL1A2P08123 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.58■■□□□ 1.37
COL1A2P08123 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.58■■□□□ 1.37
COL1A2P08123 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.58■■□□□ 1.37
COL1A2P08123 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.58■■□□□ 1.37
COL1A2P08123 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL1A2P08123 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.58■■□□□ 1.37
COL1A2P08123 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.58■■□□□ 1.37
COL1A2P08123 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.58■■□□□ 1.37
COL1A2P08123 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.58■■□□□ 1.36
COL1A2P08123 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL1A2P08123 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL1A2P08123 AC007322.1-201ENST00000426983 750 ntBASIC23.57■■□□□ 1.36
COL1A2P08123 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.57■■□□□ 1.36
COL1A2P08123 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.57■■□□□ 1.36
COL1A2P08123 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms