Protein–RNA interactions for Protein: Q8VCC8

Rapgef3, Rap guanine nucleotide exchange factor 3, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef3Q8VCC8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC36.7■■■■□ 3.47
Rapgef3Q8VCC8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
Rapgef3Q8VCC8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
Rapgef3Q8VCC8 Gm42809-201ENSMUST00000198429 1138 ntBASIC36.66■■■■□ 3.46
Rapgef3Q8VCC8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
Rapgef3Q8VCC8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC36.64■■■■□ 3.46
Rapgef3Q8VCC8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC36.64■■■■□ 3.46
Rapgef3Q8VCC8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC36.63■■■■□ 3.45
Rapgef3Q8VCC8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC36.63■■■■□ 3.45
Rapgef3Q8VCC8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC36.61■■■■□ 3.45
Rapgef3Q8VCC8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC36.61■■■■□ 3.45
Rapgef3Q8VCC8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC36.61■■■■□ 3.45
Rapgef3Q8VCC8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC36.61■■■■□ 3.45
Rapgef3Q8VCC8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC36.6■■■■□ 3.45
Rapgef3Q8VCC8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
Rapgef3Q8VCC8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
Rapgef3Q8VCC8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC36.59■■■■□ 3.45
Rapgef3Q8VCC8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC36.57■■■■□ 3.44
Rapgef3Q8VCC8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC36.56■■■■□ 3.44
Rapgef3Q8VCC8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC36.56■■■■□ 3.44
Rapgef3Q8VCC8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC36.55■■■■□ 3.44
Rapgef3Q8VCC8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
Rapgef3Q8VCC8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
Rapgef3Q8VCC8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
Rapgef3Q8VCC8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC36.51■■■■□ 3.44
Rapgef3Q8VCC8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.43
Rapgef3Q8VCC8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
Rapgef3Q8VCC8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Rapgef3Q8VCC8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
Rapgef3Q8VCC8 Gm7432-201ENSMUST00000210343 879 ntBASIC36.44■■■■□ 3.42
Rapgef3Q8VCC8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
Rapgef3Q8VCC8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
Rapgef3Q8VCC8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
Rapgef3Q8VCC8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC36.39■■■■□ 3.42
Rapgef3Q8VCC8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC36.38■■■■□ 3.41
Rapgef3Q8VCC8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC36.37■■■■□ 3.41
Rapgef3Q8VCC8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC36.37■■■■□ 3.41
Rapgef3Q8VCC8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC36.35■■■■□ 3.41
Rapgef3Q8VCC8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
Rapgef3Q8VCC8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC36.32■■■■□ 3.4
Rapgef3Q8VCC8 AC157572.2-201ENSMUST00000226970 908 ntBASIC36.32■■■■□ 3.4
Rapgef3Q8VCC8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC36.3■■■■□ 3.4
Rapgef3Q8VCC8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
Rapgef3Q8VCC8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC36.26■■■■□ 3.4
Rapgef3Q8VCC8 Mir6538-201ENSMUST00000183713 110 ntBASIC36.25■■■■□ 3.39
Rapgef3Q8VCC8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.24■■■■□ 3.39
Rapgef3Q8VCC8 Nkain2-201ENSMUST00000092602 558 ntBASIC36.24■■■■□ 3.39
Rapgef3Q8VCC8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC36.22■■■■□ 3.39
Rapgef3Q8VCC8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC36.22■■■■□ 3.39
Rapgef3Q8VCC8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC36.21■■■■□ 3.39
Rapgef3Q8VCC8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC36.2■■■■□ 3.39
Rapgef3Q8VCC8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
Rapgef3Q8VCC8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
Rapgef3Q8VCC8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC36.15■■■■□ 3.38
Rapgef3Q8VCC8 Gm11175-201ENSMUST00000116172 543 ntBASIC36.15■■■■□ 3.38
Rapgef3Q8VCC8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC36.14■■■■□ 3.38
Rapgef3Q8VCC8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC36.14■■■■□ 3.38
Rapgef3Q8VCC8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC36.13■■■■□ 3.37
Rapgef3Q8VCC8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC36.12■■■■□ 3.37
Rapgef3Q8VCC8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC36.11■■■■□ 3.37
Rapgef3Q8VCC8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
Rapgef3Q8VCC8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC36.1■■■■□ 3.37
Rapgef3Q8VCC8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC36.1■■■■□ 3.37
Rapgef3Q8VCC8 Cap2-205ENSMUST00000225824 1634 ntBASIC36.09■■■■□ 3.37
Rapgef3Q8VCC8 Gm11599-201ENSMUST00000118720 878 ntBASIC36.09■■■■□ 3.37
Rapgef3Q8VCC8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
Rapgef3Q8VCC8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
Rapgef3Q8VCC8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Rapgef3Q8VCC8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
Rapgef3Q8VCC8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC36.06■■■■□ 3.36
Rapgef3Q8VCC8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC36.03■■■■□ 3.36
Rapgef3Q8VCC8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC36.02■■■■□ 3.36
Rapgef3Q8VCC8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC36■■■■□ 3.35
Rapgef3Q8VCC8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC35.97■■■■□ 3.35
Rapgef3Q8VCC8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC35.97■■■■□ 3.35
Rapgef3Q8VCC8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC35.95■■■■□ 3.35
Rapgef3Q8VCC8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
Rapgef3Q8VCC8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Rapgef3Q8VCC8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC35.92■■■■□ 3.34
Rapgef3Q8VCC8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Rapgef3Q8VCC8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
Rapgef3Q8VCC8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC35.91■■■■□ 3.34
Rapgef3Q8VCC8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC35.9■■■■□ 3.34
Rapgef3Q8VCC8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC35.89■■■■□ 3.34
Rapgef3Q8VCC8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC35.88■■■■□ 3.33
Rapgef3Q8VCC8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC35.87■■■■□ 3.33
Rapgef3Q8VCC8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Rapgef3Q8VCC8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
Rapgef3Q8VCC8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Rapgef3Q8VCC8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC35.8■■■■□ 3.32
Rapgef3Q8VCC8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Rapgef3Q8VCC8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC35.79■■■■□ 3.32
Rapgef3Q8VCC8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC35.78■■■■□ 3.32
Rapgef3Q8VCC8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
Rapgef3Q8VCC8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC35.77■■■■□ 3.32
Rapgef3Q8VCC8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC35.75■■■■□ 3.31
Rapgef3Q8VCC8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
Rapgef3Q8VCC8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC35.74■■■■□ 3.31
Rapgef3Q8VCC8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Rapgef3Q8VCC8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms