Protein–RNA interactions for Protein: Q8CG65

Sspo, SCO-spondin, mousemouse

Predictions only

Length 4,998 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspoQ8CG65 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspoQ8CG65 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SspoQ8CG65 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC12.5□□□□□ -0.41
SspoQ8CG65 Gm43863-201ENSMUST00000203822 1192 ntBASIC12.5□□□□□ -0.41
SspoQ8CG65 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SspoQ8CG65 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SspoQ8CG65 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SspoQ8CG65 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
SspoQ8CG65 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SspoQ8CG65 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SspoQ8CG65 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SspoQ8CG65 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SspoQ8CG65 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC12.48□□□□□ -0.41
SspoQ8CG65 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SspoQ8CG65 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SspoQ8CG65 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC12.47□□□□□ -0.41
SspoQ8CG65 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SspoQ8CG65 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SspoQ8CG65 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SspoQ8CG65 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SspoQ8CG65 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
SspoQ8CG65 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SspoQ8CG65 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SspoQ8CG65 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SspoQ8CG65 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspoQ8CG65 Gm7432-201ENSMUST00000210343 879 ntBASIC12.44□□□□□ -0.42
SspoQ8CG65 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspoQ8CG65 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SspoQ8CG65 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC12.44□□□□□ -0.42
SspoQ8CG65 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SspoQ8CG65 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SspoQ8CG65 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SspoQ8CG65 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SspoQ8CG65 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SspoQ8CG65 Gm15039-201ENSMUST00000118914 875 ntBASIC12.4□□□□□ -0.42
SspoQ8CG65 AC157572.2-201ENSMUST00000226970 908 ntBASIC12.39□□□□□ -0.43
SspoQ8CG65 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SspoQ8CG65 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC12.39□□□□□ -0.43
SspoQ8CG65 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC12.39□□□□□ -0.43
SspoQ8CG65 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SspoQ8CG65 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SspoQ8CG65 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspoQ8CG65 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspoQ8CG65 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SspoQ8CG65 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SspoQ8CG65 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SspoQ8CG65 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC12.36□□□□□ -0.43
SspoQ8CG65 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspoQ8CG65 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspoQ8CG65 Cap2-205ENSMUST00000225824 1634 ntBASIC12.35□□□□□ -0.43
SspoQ8CG65 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspoQ8CG65 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SspoQ8CG65 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SspoQ8CG65 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SspoQ8CG65 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC12.34□□□□□ -0.43
SspoQ8CG65 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspoQ8CG65 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspoQ8CG65 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspoQ8CG65 Gm11599-201ENSMUST00000118720 878 ntBASIC12.33□□□□□ -0.44
SspoQ8CG65 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SspoQ8CG65 Nkain2-201ENSMUST00000092602 558 ntBASIC12.32□□□□□ -0.44
SspoQ8CG65 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SspoQ8CG65 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SspoQ8CG65 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC12.31□□□□□ -0.44
SspoQ8CG65 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SspoQ8CG65 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SspoQ8CG65 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SspoQ8CG65 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SspoQ8CG65 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
SspoQ8CG65 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC12.29□□□□□ -0.44
SspoQ8CG65 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SspoQ8CG65 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SspoQ8CG65 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SspoQ8CG65 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SspoQ8CG65 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SspoQ8CG65 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SspoQ8CG65 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC12.27□□□□□ -0.45
SspoQ8CG65 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SspoQ8CG65 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SspoQ8CG65 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC12.26□□□□□ -0.45
SspoQ8CG65 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SspoQ8CG65 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SspoQ8CG65 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SspoQ8CG65 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SspoQ8CG65 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SspoQ8CG65 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SspoQ8CG65 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SspoQ8CG65 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SspoQ8CG65 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC12.22□□□□□ -0.45
SspoQ8CG65 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SspoQ8CG65 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC12.21□□□□□ -0.46
SspoQ8CG65 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SspoQ8CG65 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC12.2□□□□□ -0.46
SspoQ8CG65 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SspoQ8CG65 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
SspoQ8CG65 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SspoQ8CG65 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SspoQ8CG65 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SspoQ8CG65 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SspoQ8CG65 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms