Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PrkdcP97313 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PrkdcP97313 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PrkdcP97313 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PrkdcP97313 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PrkdcP97313 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PrkdcP97313 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PrkdcP97313 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
PrkdcP97313 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PrkdcP97313 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PrkdcP97313 Gm7432-201ENSMUST00000210343 879 ntBASIC18.44■□□□□ 0.54
PrkdcP97313 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PrkdcP97313 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PrkdcP97313 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PrkdcP97313 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.41■□□□□ 0.54
PrkdcP97313 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PrkdcP97313 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.41■□□□□ 0.54
PrkdcP97313 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.39■□□□□ 0.53
PrkdcP97313 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PrkdcP97313 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PrkdcP97313 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PrkdcP97313 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.37■□□□□ 0.53
PrkdcP97313 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
PrkdcP97313 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PrkdcP97313 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PrkdcP97313 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.35■□□□□ 0.53
PrkdcP97313 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PrkdcP97313 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PrkdcP97313 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PrkdcP97313 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PrkdcP97313 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PrkdcP97313 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PrkdcP97313 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PrkdcP97313 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PrkdcP97313 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PrkdcP97313 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.3■□□□□ 0.52
PrkdcP97313 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PrkdcP97313 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.29■□□□□ 0.52
PrkdcP97313 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PrkdcP97313 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PrkdcP97313 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PrkdcP97313 Cap2-205ENSMUST00000225824 1634 ntBASIC18.28■□□□□ 0.52
PrkdcP97313 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PrkdcP97313 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PrkdcP97313 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PrkdcP97313 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.25■□□□□ 0.51
PrkdcP97313 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PrkdcP97313 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.24■□□□□ 0.51
PrkdcP97313 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PrkdcP97313 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.24■□□□□ 0.51
PrkdcP97313 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PrkdcP97313 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PrkdcP97313 Gm11599-201ENSMUST00000118720 878 ntBASIC18.23■□□□□ 0.51
PrkdcP97313 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.23■□□□□ 0.51
PrkdcP97313 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PrkdcP97313 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PrkdcP97313 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.22■□□□□ 0.51
PrkdcP97313 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PrkdcP97313 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
PrkdcP97313 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PrkdcP97313 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PrkdcP97313 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PrkdcP97313 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PrkdcP97313 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PrkdcP97313 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PrkdcP97313 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
PrkdcP97313 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PrkdcP97313 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PrkdcP97313 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PrkdcP97313 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PrkdcP97313 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.13■□□□□ 0.49
PrkdcP97313 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PrkdcP97313 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PrkdcP97313 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PrkdcP97313 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PrkdcP97313 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PrkdcP97313 Gm15039-201ENSMUST00000118914 875 ntBASIC18.1■□□□□ 0.49
PrkdcP97313 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PrkdcP97313 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PrkdcP97313 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PrkdcP97313 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PrkdcP97313 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PrkdcP97313 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PrkdcP97313 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PrkdcP97313 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.07■□□□□ 0.48
PrkdcP97313 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PrkdcP97313 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PrkdcP97313 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PrkdcP97313 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PrkdcP97313 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PrkdcP97313 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PrkdcP97313 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.04■□□□□ 0.48
PrkdcP97313 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PrkdcP97313 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PrkdcP97313 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.03■□□□□ 0.48
PrkdcP97313 Nkain2-201ENSMUST00000092602 558 ntBASIC18.03■□□□□ 0.48
PrkdcP97313 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PrkdcP97313 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PrkdcP97313 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PrkdcP97313 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms