Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
Cntnap1O54991 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Cntnap1O54991 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC35.06■■■■□ 3.2
Cntnap1O54991 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
Cntnap1O54991 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
Cntnap1O54991 Gm43863-201ENSMUST00000203822 1192 ntBASIC35.04■■■■□ 3.2
Cntnap1O54991 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC35.03■■■■□ 3.2
Cntnap1O54991 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Cntnap1O54991 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Cntnap1O54991 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC35.02■■■■□ 3.2
Cntnap1O54991 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC35.01■■■■□ 3.2
Cntnap1O54991 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC35■■■■□ 3.19
Cntnap1O54991 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC35■■■■□ 3.19
Cntnap1O54991 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC35■■■■□ 3.19
Cntnap1O54991 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Cntnap1O54991 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
Cntnap1O54991 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC34.96■■■■□ 3.19
Cntnap1O54991 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
Cntnap1O54991 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
Cntnap1O54991 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.19
Cntnap1O54991 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Cntnap1O54991 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC34.93■■■■□ 3.18
Cntnap1O54991 Mir6538-201ENSMUST00000183713 110 ntBASIC34.93■■■■□ 3.18
Cntnap1O54991 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
Cntnap1O54991 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Cntnap1O54991 Gm7432-201ENSMUST00000210343 879 ntBASIC34.88■■■■□ 3.17
Cntnap1O54991 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Cntnap1O54991 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
Cntnap1O54991 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Cntnap1O54991 Gm11175-201ENSMUST00000116172 543 ntBASIC34.85■■■■□ 3.17
Cntnap1O54991 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Cntnap1O54991 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC34.83■■■■□ 3.17
Cntnap1O54991 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Cntnap1O54991 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC34.82■■■■□ 3.16
Cntnap1O54991 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC34.82■■■■□ 3.16
Cntnap1O54991 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Cntnap1O54991 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC34.8■■■■□ 3.16
Cntnap1O54991 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC34.79■■■■□ 3.16
Cntnap1O54991 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC34.76■■■■□ 3.16
Cntnap1O54991 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
Cntnap1O54991 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC34.74■■■■□ 3.15
Cntnap1O54991 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
Cntnap1O54991 Cap2-205ENSMUST00000225824 1634 ntBASIC34.73■■■■□ 3.15
Cntnap1O54991 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Cntnap1O54991 AC157572.2-201ENSMUST00000226970 908 ntBASIC34.7■■■■□ 3.15
Cntnap1O54991 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Cntnap1O54991 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC34.69■■■■□ 3.14
Cntnap1O54991 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
Cntnap1O54991 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC34.69■■■■□ 3.14
Cntnap1O54991 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC34.66■■■■□ 3.14
Cntnap1O54991 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC34.66■■■■□ 3.14
Cntnap1O54991 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.66■■■■□ 3.14
Cntnap1O54991 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
Cntnap1O54991 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
Cntnap1O54991 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC34.63■■■■□ 3.13
Cntnap1O54991 Nkain2-201ENSMUST00000092602 558 ntBASIC34.63■■■■□ 3.13
Cntnap1O54991 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Cntnap1O54991 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC34.62■■■■□ 3.13
Cntnap1O54991 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Cntnap1O54991 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC34.62■■■■□ 3.13
Cntnap1O54991 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC34.62■■■■□ 3.13
Cntnap1O54991 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC34.61■■■■□ 3.13
Cntnap1O54991 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC34.61■■■■□ 3.13
Cntnap1O54991 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
Cntnap1O54991 Gm11599-201ENSMUST00000118720 878 ntBASIC34.59■■■■□ 3.13
Cntnap1O54991 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC34.58■■■■□ 3.13
Cntnap1O54991 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Cntnap1O54991 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
Cntnap1O54991 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC34.53■■■■□ 3.12
Cntnap1O54991 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Cntnap1O54991 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
Cntnap1O54991 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC34.48■■■■□ 3.11
Cntnap1O54991 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC34.45■■■■□ 3.11
Cntnap1O54991 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC34.44■■■■□ 3.1
Cntnap1O54991 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Cntnap1O54991 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC34.41■■■■□ 3.1
Cntnap1O54991 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC34.4■■■■□ 3.1
Cntnap1O54991 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC34.39■■■■□ 3.1
Cntnap1O54991 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC34.39■■■■□ 3.1
Cntnap1O54991 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Cntnap1O54991 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC34.36■■■■□ 3.09
Cntnap1O54991 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC34.36■■■■□ 3.09
Cntnap1O54991 Gm15039-201ENSMUST00000118914 875 ntBASIC34.35■■■■□ 3.09
Cntnap1O54991 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Cntnap1O54991 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
Cntnap1O54991 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
Cntnap1O54991 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC34.3■■■■□ 3.08
Cntnap1O54991 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC34.27■■■■□ 3.08
Cntnap1O54991 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC34.26■■■■□ 3.08
Cntnap1O54991 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Cntnap1O54991 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC34.2■■■■□ 3.07
Cntnap1O54991 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC34.2■■■■□ 3.07
Cntnap1O54991 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC34.2■■■■□ 3.07
Cntnap1O54991 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC34.19■■■■□ 3.06
Cntnap1O54991 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Cntnap1O54991 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Cntnap1O54991 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC34.11■■■■□ 3.05
Cntnap1O54991 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Cntnap1O54991 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
Cntnap1O54991 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms