Protein–RNA interactions for Protein: O35452

Tnxb, Tenascin X, mousemouse

Predictions only

Length 4,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnxbO35452 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TnxbO35452 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TnxbO35452 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TnxbO35452 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TnxbO35452 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TnxbO35452 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TnxbO35452 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TnxbO35452 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TnxbO35452 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TnxbO35452 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TnxbO35452 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TnxbO35452 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TnxbO35452 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TnxbO35452 Mipep-204ENSMUST00000225043 1548 ntBASIC19.61■□□□□ 0.73
TnxbO35452 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.58■□□□□ 0.73
TnxbO35452 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TnxbO35452 Gm22567-201ENSMUST00000175542 342 ntBASIC19.58■□□□□ 0.73
TnxbO35452 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TnxbO35452 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
TnxbO35452 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TnxbO35452 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TnxbO35452 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.55■□□□□ 0.72
TnxbO35452 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TnxbO35452 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TnxbO35452 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TnxbO35452 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TnxbO35452 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TnxbO35452 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TnxbO35452 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TnxbO35452 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TnxbO35452 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TnxbO35452 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TnxbO35452 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TnxbO35452 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TnxbO35452 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TnxbO35452 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.5■□□□□ 0.71
TnxbO35452 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TnxbO35452 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.47■□□□□ 0.71
TnxbO35452 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TnxbO35452 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TnxbO35452 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TnxbO35452 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TnxbO35452 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TnxbO35452 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TnxbO35452 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TnxbO35452 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.43■□□□□ 0.7
TnxbO35452 Gm11599-201ENSMUST00000118720 878 ntBASIC19.42■□□□□ 0.7
TnxbO35452 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.42■□□□□ 0.7
TnxbO35452 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TnxbO35452 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TnxbO35452 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TnxbO35452 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.4■□□□□ 0.7
TnxbO35452 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TnxbO35452 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.39■□□□□ 0.69
TnxbO35452 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TnxbO35452 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TnxbO35452 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
TnxbO35452 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TnxbO35452 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TnxbO35452 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.36■□□□□ 0.69
TnxbO35452 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TnxbO35452 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TnxbO35452 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.35■□□□□ 0.69
TnxbO35452 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TnxbO35452 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.34■□□□□ 0.69
TnxbO35452 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TnxbO35452 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TnxbO35452 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TnxbO35452 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TnxbO35452 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TnxbO35452 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.31■□□□□ 0.68
TnxbO35452 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TnxbO35452 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.29■□□□□ 0.68
TnxbO35452 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TnxbO35452 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TnxbO35452 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.27■□□□□ 0.68
TnxbO35452 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TnxbO35452 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TnxbO35452 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.24■□□□□ 0.67
TnxbO35452 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.24■□□□□ 0.67
TnxbO35452 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.23■□□□□ 0.67
TnxbO35452 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.23■□□□□ 0.67
TnxbO35452 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TnxbO35452 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.23■□□□□ 0.67
TnxbO35452 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TnxbO35452 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.21■□□□□ 0.67
TnxbO35452 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TnxbO35452 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TnxbO35452 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TnxbO35452 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TnxbO35452 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TnxbO35452 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TnxbO35452 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TnxbO35452 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TnxbO35452 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TnxbO35452 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TnxbO35452 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TnxbO35452 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TnxbO35452 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TnxbO35452 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms