Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Herc1E9PZP8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.38■□□□□ 0.05
Herc1E9PZP8 Gm11599-201ENSMUST00000118720 878 ntBASIC15.38■□□□□ 0.05
Herc1E9PZP8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Herc1E9PZP8 Gm10524-201ENSMUST00000181931 1893 ntBASIC15.37■□□□□ 0.05
Herc1E9PZP8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Herc1E9PZP8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.36■□□□□ 0.05
Herc1E9PZP8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC15.35■□□□□ 0.05
Herc1E9PZP8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Herc1E9PZP8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Herc1E9PZP8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Herc1E9PZP8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Herc1E9PZP8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Herc1E9PZP8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Herc1E9PZP8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Herc1E9PZP8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Herc1E9PZP8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Herc1E9PZP8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Herc1E9PZP8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Herc1E9PZP8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Herc1E9PZP8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Herc1E9PZP8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Herc1E9PZP8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.3■□□□□ 0.04
Herc1E9PZP8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Herc1E9PZP8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Herc1E9PZP8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Herc1E9PZP8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Herc1E9PZP8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Herc1E9PZP8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.26■□□□□ 0.03
Herc1E9PZP8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Herc1E9PZP8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC15.26■□□□□ 0.03
Herc1E9PZP8 Gm42596-201ENSMUST00000196305 1958 ntBASIC15.24■□□□□ 0.03
Herc1E9PZP8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Herc1E9PZP8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Herc1E9PZP8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Herc1E9PZP8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Herc1E9PZP8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.24■□□□□ 0.03
Herc1E9PZP8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Herc1E9PZP8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Herc1E9PZP8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC15.23■□□□□ 0.03
Herc1E9PZP8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Herc1E9PZP8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Herc1E9PZP8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Herc1E9PZP8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.22■□□□□ 0.03
Herc1E9PZP8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.22■□□□□ 0.03
Herc1E9PZP8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Herc1E9PZP8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Herc1E9PZP8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Herc1E9PZP8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Herc1E9PZP8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Herc1E9PZP8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Herc1E9PZP8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Herc1E9PZP8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC15.18■□□□□ 0.02
Herc1E9PZP8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Herc1E9PZP8 Psd-208ENSMUST00000224556 2034 ntBASIC15.17■□□□□ 0.02
Herc1E9PZP8 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.17■□□□□ 0.02
Herc1E9PZP8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Herc1E9PZP8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Herc1E9PZP8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.16■□□□□ 0.02
Herc1E9PZP8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Herc1E9PZP8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC15.16■□□□□ 0.02
Herc1E9PZP8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.15■□□□□ 0.02
Herc1E9PZP8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Herc1E9PZP8 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.15■□□□□ 0.02
Herc1E9PZP8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Herc1E9PZP8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Herc1E9PZP8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Herc1E9PZP8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Herc1E9PZP8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Herc1E9PZP8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Herc1E9PZP8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Herc1E9PZP8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Herc1E9PZP8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.12■□□□□ 0.01
Herc1E9PZP8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Herc1E9PZP8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Herc1E9PZP8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Herc1E9PZP8 Nkain2-201ENSMUST00000092602 558 ntBASIC15.1■□□□□ 0.01
Herc1E9PZP8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC15.1■□□□□ 0.01
Herc1E9PZP8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Herc1E9PZP8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Herc1E9PZP8 Gm5812-201ENSMUST00000061073 957 ntBASIC15.08■□□□□ 0
Herc1E9PZP8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC15.08■□□□□ 0
Herc1E9PZP8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.07■□□□□ 0
Herc1E9PZP8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Herc1E9PZP8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Herc1E9PZP8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC15.05■□□□□ 0
Herc1E9PZP8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.04■□□□□ -0
Herc1E9PZP8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Herc1E9PZP8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Herc1E9PZP8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.03■□□□□ -0
Herc1E9PZP8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.03■□□□□ -0
Herc1E9PZP8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.02■□□□□ -0
Herc1E9PZP8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.02■□□□□ -0
Herc1E9PZP8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Herc1E9PZP8 Serp2-204ENSMUST00000228055 705 ntBASIC15.01□□□□□ -0.01
Herc1E9PZP8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.01□□□□□ -0.01
Herc1E9PZP8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Herc1E9PZP8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Herc1E9PZP8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15□□□□□ -0.01
Herc1E9PZP8 AC157572.2-201ENSMUST00000226970 908 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms