Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.93■■□□□ 1.26
Hist1h2acC0HKE2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Hist1h2acC0HKE2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Hist1h2acC0HKE2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Hist1h2acC0HKE2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hist1h2acC0HKE2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hist1h2acC0HKE2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hist1h2acC0HKE2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Hist1h2acC0HKE2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Hist1h2acC0HKE2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.89■■□□□ 1.26
Hist1h2acC0HKE2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.89■■□□□ 1.26
Hist1h2acC0HKE2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Hist1h2acC0HKE2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.87■■□□□ 1.25
Hist1h2acC0HKE2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Hist1h2acC0HKE2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Hist1h2acC0HKE2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.86■■□□□ 1.25
Hist1h2acC0HKE2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Hist1h2acC0HKE2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Hist1h2acC0HKE2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Hist1h2acC0HKE2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Hist1h2acC0HKE2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Hist1h2acC0HKE2 Zxda-201ENSMUST00000117281 2621 ntBASIC22.84■■□□□ 1.25
Hist1h2acC0HKE2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Hist1h2acC0HKE2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Hist1h2acC0HKE2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Hist1h2acC0HKE2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hist1h2acC0HKE2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hist1h2acC0HKE2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Hist1h2acC0HKE2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Hist1h2acC0HKE2 Gm24804-201ENSMUST00000174982 85 ntBASIC22.76■■□□□ 1.23
Hist1h2acC0HKE2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Hist1h2acC0HKE2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Hist1h2acC0HKE2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Hist1h2acC0HKE2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Hist1h2acC0HKE2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Hist1h2acC0HKE2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Hist1h2acC0HKE2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Hist1h2acC0HKE2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Hist1h2acC0HKE2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Hist1h2acC0HKE2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Hist1h2acC0HKE2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Hist1h2acC0HKE2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Hist1h2acC0HKE2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Hist1h2acC0HKE2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.71■■□□□ 1.23
Hist1h2acC0HKE2 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.71■■□□□ 1.23
Hist1h2acC0HKE2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Hist1h2acC0HKE2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Hist1h2acC0HKE2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Hist1h2acC0HKE2 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.7■■□□□ 1.22
Hist1h2acC0HKE2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Hist1h2acC0HKE2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Hist1h2acC0HKE2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Hist1h2acC0HKE2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Hist1h2acC0HKE2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Hist1h2acC0HKE2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Hist1h2acC0HKE2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Hist1h2acC0HKE2 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.64■■□□□ 1.21
Hist1h2acC0HKE2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Hist1h2acC0HKE2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Hist1h2acC0HKE2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Hist1h2acC0HKE2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Hist1h2acC0HKE2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Hist1h2acC0HKE2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Hist1h2acC0HKE2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Hist1h2acC0HKE2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Hist1h2acC0HKE2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Hist1h2acC0HKE2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Hist1h2acC0HKE2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Hist1h2acC0HKE2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.6■■□□□ 1.21
Hist1h2acC0HKE2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hist1h2acC0HKE2 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.59■■□□□ 1.21
Hist1h2acC0HKE2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hist1h2acC0HKE2 Gm16148-201ENSMUST00000119653 893 ntBASIC22.59■■□□□ 1.21
Hist1h2acC0HKE2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Hist1h2acC0HKE2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hist1h2acC0HKE2 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.58■■□□□ 1.21
Hist1h2acC0HKE2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Hist1h2acC0HKE2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hist1h2acC0HKE2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Hist1h2acC0HKE2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Hist1h2acC0HKE2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Hist1h2acC0HKE2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Hist1h2acC0HKE2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hist1h2acC0HKE2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hist1h2acC0HKE2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hist1h2acC0HKE2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Hist1h2acC0HKE2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Hist1h2acC0HKE2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Hist1h2acC0HKE2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Hist1h2acC0HKE2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hist1h2acC0HKE2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.49■■□□□ 1.19
Hist1h2acC0HKE2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hist1h2acC0HKE2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.47■■□□□ 1.19
Hist1h2acC0HKE2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hist1h2acC0HKE2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Hist1h2acC0HKE2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hist1h2acC0HKE2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Hist1h2acC0HKE2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
Hist1h2acC0HKE2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Hist1h2acC0HKE2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms