Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 HSP60YLR259C 1719 nt9.83□□□□□ -0.84
TY1A-MR1Q04215 CWP1YKL096W 720 nt9.83□□□□□ -0.84
TY1A-MR1Q04215 YPL071CYPL071C 471 nt9.79□□□□□ -0.84
TY1A-MR1Q04215 IMP2'YIL154C 1041 nt9.78□□□□□ -0.84
TY1A-MR1Q04215 ERF2YLR246W 1080 nt9.78□□□□□ -0.84
TY1A-MR1Q04215 SOR2YDL246C 1074 nt9.77□□□□□ -0.85
TY1A-MR1Q04215 SOR1YJR159W 1074 nt9.77□□□□□ -0.85
TY1A-MR1Q04215 CRR1YLR213C 1269 nt9.77□□□□□ -0.85
TY1A-MR1Q04215 YGL188CYGL188C 174 nt9.76□□□□□ -0.85
TY1A-MR1Q04215 UME6YDR207C 2511 nt9.74□□□□□ -0.85
TY1A-MR1Q04215 YHR056W-AYHR056W-A 435 nt9.73□□□□□ -0.85
TY1A-MR1Q04215 DSK2YMR276W 1122 nt9.73□□□□□ -0.85
TY1A-MR1Q04215 YOR169CYOR169C 465 nt9.73□□□□□ -0.85
TY1A-MR1Q04215 GLK1YCL040W 1503 nt9.72□□□□□ -0.85
TY1A-MR1Q04215 YIH1YCR059C 777 nt9.72□□□□□ -0.85
TY1A-MR1Q04215 YDR433WYDR433W 441 nt9.72□□□□□ -0.85
TY1A-MR1Q04215 MXR2YCL033C 507 nt9.72□□□□□ -0.85
TY1A-MR1Q04215 ATP6Q0085 780 nt9.71□□□□□ -0.86
TY1A-MR1Q04215 AIR1YIL079C 1083 nt9.71□□□□□ -0.86
TY1A-MR1Q04215 YNL067W-AYNL067W-A 147 nt9.7□□□□□ -0.86
TY1A-MR1Q04215 YPL168WYPL168W 1293 nt9.7□□□□□ -0.86
TY1A-MR1Q04215 YCL042WYCL042W 360 nt9.69□□□□□ -0.86
TY1A-MR1Q04215 URE2YNL229C 1065 nt9.68□□□□□ -0.86
TY1A-MR1Q04215 FUR4YBR021W 1902 nt9.67□□□□□ -0.86
TY1A-MR1Q04215 FMP45YDL222C 930 nt9.67□□□□□ -0.86
TY1A-MR1Q04215 PUS2YGL063W 1113 nt9.67□□□□□ -0.86
TY1A-MR1Q04215 YJL118WYJL118W 660 nt9.67□□□□□ -0.86
TY1A-MR1Q04215 YLL053CYLL053C 459 nt9.67□□□□□ -0.86
TY1A-MR1Q04215 HEM12YDR047W 1089 nt9.66□□□□□ -0.86
TY1A-MR1Q04215 YHM2YMR241W 945 nt9.66□□□□□ -0.86
TY1A-MR1Q04215 RNQ1YCL028W 1218 nt9.66□□□□□ -0.86
TY1A-MR1Q04215 ALG12YNR030W 1656 nt9.65□□□□□ -0.86
TY1A-MR1Q04215 MIC10YCL057C-A 294 nt9.65□□□□□ -0.86
TY1A-MR1Q04215 ATF2YGR177C 1608 nt9.64□□□□□ -0.87
TY1A-MR1Q04215 YPR011CYPR011C 981 nt9.63□□□□□ -0.87
TY1A-MR1Q04215 CCA1YER168C 1641 nt9.63□□□□□ -0.87
TY1A-MR1Q04215 RAX1YOR301W 1308 nt9.62□□□□□ -0.87
TY1A-MR1Q04215 KTR3YBR205W 1215 nt9.61□□□□□ -0.87
TY1A-MR1Q04215 FRD1YEL047C 1413 nt9.61□□□□□ -0.87
TY1A-MR1Q04215 SNG1YGR197C 1644 nt9.6□□□□□ -0.87
TY1A-MR1Q04215 ERV46YAL042W 1248 nt9.6□□□□□ -0.87
TY1A-MR1Q04215 YFL067WYFL067W 528 nt9.59□□□□□ -0.87
TY1A-MR1Q04215 MCH5YOR306C 1566 nt9.58□□□□□ -0.88
TY1A-MR1Q04215 NEM1YHR004C 1341 nt9.57□□□□□ -0.88
TY1A-MR1Q04215 FTR1YER145C 1215 nt9.57□□□□□ -0.88
TY1A-MR1Q04215 LPX1YOR084W 1164 nt9.57□□□□□ -0.88
TY1A-MR1Q04215 YKR040CYKR040C 504 nt9.56□□□□□ -0.88
TY1A-MR1Q04215 PRP4YPR178W 1398 nt9.55□□□□□ -0.88
TY1A-MR1Q04215 tM(CAU)CtM(CAU)C 72 nt9.54□□□□□ -0.88
TY1A-MR1Q04215 IMT4tM(CAU)E 72 nt9.54□□□□□ -0.88
TY1A-MR1Q04215 IMT3tM(CAU)J3 72 nt9.54□□□□□ -0.88
TY1A-MR1Q04215 IMT1tM(CAU)O1 72 nt9.54□□□□□ -0.88
TY1A-MR1Q04215 IMT2tM(CAU)P 72 nt9.54□□□□□ -0.88
TY1A-MR1Q04215 GAL1YBR020W 1587 nt9.54□□□□□ -0.88
TY1A-MR1Q04215 TRM5YHR070W 1500 nt9.53□□□□□ -0.88
TY1A-MR1Q04215 YEL076C-AYEL076C-A 651 nt9.52□□□□□ -0.89
TY1A-MR1Q04215 YEL076CYEL076C 651 nt9.52□□□□□ -0.89
TY1A-MR1Q04215 DIC1YLR348C 897 nt9.52□□□□□ -0.89
TY1A-MR1Q04215 YLR464WYLR464W 651 nt9.52□□□□□ -0.89
TY1A-MR1Q04215 DDR2YOL052C-A 186 nt9.51□□□□□ -0.89
TY1A-MR1Q04215 AAC1YMR056C 930 nt9.5□□□□□ -0.89
TY1A-MR1Q04215 YJL107CYJL107C 1164 nt9.49□□□□□ -0.89
TY1A-MR1Q04215 DPS1YLL018C 1674 nt9.48□□□□□ -0.89
TY1A-MR1Q04215 YDL086C-AYDL086C-A 435 nt9.48□□□□□ -0.89
TY1A-MR1Q04215 YAL016C-BYAL016C-B 186 nt9.47□□□□□ -0.89
TY1A-MR1Q04215 STD1YOR047C 1335 nt9.47□□□□□ -0.89
TY1A-MR1Q04215 LSM12YHR121W 564 nt9.46□□□□□ -0.9
TY1A-MR1Q04215 THP3YPR045C 1413 nt9.46□□□□□ -0.9
TY1A-MR1Q04215 ANP1YEL036C 1503 nt9.46□□□□□ -0.9
TY1A-MR1Q04215 BNA2YJR078W 1362 nt9.44□□□□□ -0.9
TY1A-MR1Q04215 BMT6YLR063W 1098 nt9.43□□□□□ -0.9
TY1A-MR1Q04215 YEL074WYEL074W 339 nt9.42□□□□□ -0.9
TY1A-MR1Q04215 AQY1YPR192W 918 nt9.42□□□□□ -0.9
TY1A-MR1Q04215 MIC12YBR262C 321 nt9.42□□□□□ -0.9
TY1A-MR1Q04215 YKR005CYKR005C 1578 nt9.41□□□□□ -0.9
TY1A-MR1Q04215 WSC2YNL283C 1512 nt9.41□□□□□ -0.9
TY1A-MR1Q04215 RSM23YGL129C 1353 nt9.4□□□□□ -0.9
TY1A-MR1Q04215 AST1YBL069W 1290 nt9.4□□□□□ -0.9
TY1A-MR1Q04215 AGP1YCL025C 1902 nt9.4□□□□□ -0.9
TY1A-MR1Q04215 NAR1YNL240C 1476 nt9.39□□□□□ -0.91
TY1A-MR1Q04215 DUS1YML080W 1272 nt9.37□□□□□ -0.91
TY1A-MR1Q04215 STB1YNL309W 1263 nt9.37□□□□□ -0.91
TY1A-MR1Q04215 YCL074WYCL074W 927 nt9.36□□□□□ -0.91
TY1A-MR1Q04215 PHO92YDR374C 921 nt9.36□□□□□ -0.91
TY1A-MR1Q04215 YDR524C-BYDR524C-B 201 nt9.36□□□□□ -0.91
TY1A-MR1Q04215 PEX27YOR193W 1131 nt9.36□□□□□ -0.91
TY1A-MR1Q04215 SNF1YDR477W 1902 nt9.36□□□□□ -0.91
TY1A-MR1Q04215 SPC25YER018C 666 nt9.35□□□□□ -0.91
TY1A-MR1Q04215 BIO5YNR056C 1686 nt9.35□□□□□ -0.91
TY1A-MR1Q04215 YHL044WYHL044W 708 nt9.34□□□□□ -0.91
TY1A-MR1Q04215 FEN2YCR028C 1539 nt9.34□□□□□ -0.91
TY1A-MR1Q04215 YGR259CYGR259C 441 nt9.33□□□□□ -0.92
TY1A-MR1Q04215 MOD5YOR274W 1287 nt9.32□□□□□ -0.92
TY1A-MR1Q04215 GPI16YHR188C 1833 nt9.32□□□□□ -0.92
TY1A-MR1Q04215 YLR036CYLR036C 612 nt9.31□□□□□ -0.92
TY1A-MR1Q04215 HHO1YPL127C 777 nt9.31□□□□□ -0.92
TY1A-MR1Q04215 YPL041CYPL041C 624 nt9.3□□□□□ -0.92
TY1A-MR1Q04215 PTH1YHR189W 573 nt9.29□□□□□ -0.92
TY1A-MR1Q04215 TIM23YNR017W 669 nt9.29□□□□□ -0.92
TY1A-MR1Q04215 IRC24YIR036C 792 nt9.28□□□□□ -0.92
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms