Protein–RNA interactions for Protein: P0CI26

TRIM49C, Tripartite motif-containing protein 49C, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49CP0CI26 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.48■■□□□ 1.51
TRIM49CP0CI26 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
TRIM49CP0CI26 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM49CP0CI26 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM49CP0CI26 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
TRIM49CP0CI26 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM49CP0CI26 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.47■■□□□ 1.51
TRIM49CP0CI26 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM49CP0CI26 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM49CP0CI26 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM49CP0CI26 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.46■■□□□ 1.51
TRIM49CP0CI26 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRIM49CP0CI26 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TRIM49CP0CI26 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.46■■□□□ 1.51
TRIM49CP0CI26 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
TRIM49CP0CI26 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRIM49CP0CI26 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
TRIM49CP0CI26 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
TRIM49CP0CI26 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TRIM49CP0CI26 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
TRIM49CP0CI26 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.45■■□□□ 1.5
TRIM49CP0CI26 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
TRIM49CP0CI26 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.45■■□□□ 1.5
TRIM49CP0CI26 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRIM49CP0CI26 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.44■■□□□ 1.5
TRIM49CP0CI26 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.44■■□□□ 1.5
TRIM49CP0CI26 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.44■■□□□ 1.5
TRIM49CP0CI26 MIR6724-1-201ENST00000616420 92 ntBASIC24.44■■□□□ 1.5
TRIM49CP0CI26 MIR6724-2-201ENST00000616483 92 ntBASIC24.44■■□□□ 1.5
TRIM49CP0CI26 MIR6724-4-201ENST00000617390 92 ntBASIC24.44■■□□□ 1.5
TRIM49CP0CI26 MIR6724-3-201ENST00000622482 92 ntBASIC24.44■■□□□ 1.5
TRIM49CP0CI26 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
TRIM49CP0CI26 DUSP8P3-201ENST00000399571 1760 ntBASIC24.44■■□□□ 1.5
TRIM49CP0CI26 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
TRIM49CP0CI26 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM49CP0CI26 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.43■■□□□ 1.5
TRIM49CP0CI26 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.43■■□□□ 1.5
TRIM49CP0CI26 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM49CP0CI26 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM49CP0CI26 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM49CP0CI26 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM49CP0CI26 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.43■■□□□ 1.5
TRIM49CP0CI26 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.43■■□□□ 1.5
TRIM49CP0CI26 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.43■■□□□ 1.5
TRIM49CP0CI26 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM49CP0CI26 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM49CP0CI26 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM49CP0CI26 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
TRIM49CP0CI26 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRIM49CP0CI26 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
TRIM49CP0CI26 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRIM49CP0CI26 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TRIM49CP0CI26 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.41■■□□□ 1.5
TRIM49CP0CI26 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.41■■□□□ 1.5
TRIM49CP0CI26 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.41■■□□□ 1.5
TRIM49CP0CI26 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM49CP0CI26 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
TRIM49CP0CI26 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM49CP0CI26 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.41■■□□□ 1.5
TRIM49CP0CI26 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM49CP0CI26 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM49CP0CI26 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM49CP0CI26 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM49CP0CI26 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM49CP0CI26 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.41■■□□□ 1.5
TRIM49CP0CI26 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM49CP0CI26 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM49CP0CI26 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.4■■□□□ 1.5
TRIM49CP0CI26 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.4■■□□□ 1.5
TRIM49CP0CI26 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.4■■□□□ 1.5
TRIM49CP0CI26 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
TRIM49CP0CI26 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.4■■□□□ 1.5
TRIM49CP0CI26 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.4■■□□□ 1.5
TRIM49CP0CI26 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM49CP0CI26 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.4■■□□□ 1.5
TRIM49CP0CI26 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM49CP0CI26 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.4■■□□□ 1.5
TRIM49CP0CI26 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.5
TRIM49CP0CI26 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.39■■□□□ 1.5
TRIM49CP0CI26 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.39■■□□□ 1.49
TRIM49CP0CI26 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.39■■□□□ 1.49
TRIM49CP0CI26 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TRIM49CP0CI26 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.39■■□□□ 1.49
TRIM49CP0CI26 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.39■■□□□ 1.49
TRIM49CP0CI26 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TRIM49CP0CI26 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TRIM49CP0CI26 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.38■■□□□ 1.49
TRIM49CP0CI26 AC133561.1-201ENST00000568600 2415 ntBASIC24.38■■□□□ 1.49
TRIM49CP0CI26 AC009102.2-201ENST00000606772 1639 ntBASIC24.38■■□□□ 1.49
TRIM49CP0CI26 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM49CP0CI26 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM49CP0CI26 AC068473.5-201ENST00000616428 2072 ntBASIC24.38■■□□□ 1.49
TRIM49CP0CI26 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM49CP0CI26 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM49CP0CI26 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
TRIM49CP0CI26 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.37■■□□□ 1.49
TRIM49CP0CI26 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM49CP0CI26 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.37■■□□□ 1.49
TRIM49CP0CI26 AL356441.2-201ENST00000443009 864 ntBASIC24.37■■□□□ 1.49
TRIM49CP0CI26 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms