Protein–RNA interactions for Protein: O60216

RAD21, Double-strand-break repair protein rad21 homolog, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD21O60216 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAD21O60216 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RAD21O60216 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RAD21O60216 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RAD21O60216 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.34■■□□□ 1.81
RAD21O60216 MIR3181-201ENST00000578512 73 ntBASIC26.34■■□□□ 1.81
RAD21O60216 AC011298.3-201ENST00000615796 283 ntBASIC26.34■■□□□ 1.81
RAD21O60216 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.34■■□□□ 1.81
RAD21O60216 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAD21O60216 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAD21O60216 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RAD21O60216 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RAD21O60216 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RAD21O60216 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.33■■□□□ 1.81
RAD21O60216 pRNA.6-201ENST00000610482 90 ntBASIC26.33■■□□□ 1.81
RAD21O60216 pRNA.5-201ENST00000612139 90 ntBASIC26.33■■□□□ 1.81
RAD21O60216 pRNA.11-201ENST00000618423 90 ntBASIC26.33■■□□□ 1.81
RAD21O60216 pRNA.13-201ENST00000619112 90 ntBASIC26.33■■□□□ 1.81
RAD21O60216 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RAD21O60216 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RAD21O60216 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RAD21O60216 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
RAD21O60216 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RAD21O60216 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.32■■□□□ 1.8
RAD21O60216 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RAD21O60216 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RAD21O60216 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RAD21O60216 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.32■■□□□ 1.8
RAD21O60216 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.32■■□□□ 1.8
RAD21O60216 AL138724.1-201ENST00000606771 1088 ntBASIC26.32■■□□□ 1.8
RAD21O60216 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RAD21O60216 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAD21O60216 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAD21O60216 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
RAD21O60216 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAD21O60216 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAD21O60216 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.31■■□□□ 1.8
RAD21O60216 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.31■■□□□ 1.8
RAD21O60216 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAD21O60216 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAD21O60216 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC26.3■■□□□ 1.8
RAD21O60216 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RAD21O60216 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26.3■■□□□ 1.8
RAD21O60216 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
RAD21O60216 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.3■■□□□ 1.8
RAD21O60216 AC091305.1-201ENST00000479476 895 ntBASIC26.3■■□□□ 1.8
RAD21O60216 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.3■■□□□ 1.8
RAD21O60216 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
RAD21O60216 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RAD21O60216 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.3■■□□□ 1.8
RAD21O60216 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RAD21O60216 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RAD21O60216 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.29■■□□□ 1.8
RAD21O60216 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RAD21O60216 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RAD21O60216 AC099791.1-201ENST00000416440 715 ntBASIC26.29■■□□□ 1.8
RAD21O60216 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.29■■□□□ 1.8
RAD21O60216 CA15P2-201ENST00000611168 834 ntBASIC26.29■■□□□ 1.8
RAD21O60216 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.29■■□□□ 1.8
RAD21O60216 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RAD21O60216 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
RAD21O60216 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RAD21O60216 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
RAD21O60216 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
RAD21O60216 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RAD21O60216 AC027682.1-201ENST00000562846 899 ntBASIC26.28■■□□□ 1.8
RAD21O60216 AC136469.2-201ENST00000623944 1028 ntBASIC26.28■■□□□ 1.8
RAD21O60216 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RAD21O60216 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RAD21O60216 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.28■■□□□ 1.8
RAD21O60216 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.28■■□□□ 1.8
RAD21O60216 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RAD21O60216 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RAD21O60216 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
RAD21O60216 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RAD21O60216 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RAD21O60216 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.27■■□□□ 1.8
RAD21O60216 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RAD21O60216 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
RAD21O60216 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.27■■□□□ 1.8
RAD21O60216 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.27■■□□□ 1.8
RAD21O60216 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RAD21O60216 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RAD21O60216 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RAD21O60216 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
RAD21O60216 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
RAD21O60216 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
RAD21O60216 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.26■■□□□ 1.79
RAD21O60216 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.26■■□□□ 1.79
RAD21O60216 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.26■■□□□ 1.79
RAD21O60216 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
RAD21O60216 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RAD21O60216 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RAD21O60216 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RAD21O60216 RASA4CP-201ENST00000424092 1398 ntBASIC26.25■■□□□ 1.79
RAD21O60216 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RAD21O60216 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.25■■□□□ 1.79
RAD21O60216 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
RAD21O60216 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RAD21O60216 AC141586.4-201ENST00000624558 1573 ntBASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms