Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.29■■□□□ 1
TRBV5-3A0A0A0MS03 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.29■■□□□ 1
TRBV5-3A0A0A0MS03 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV5-3A0A0A0MS03 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV5-3A0A0A0MS03 AF131216.4-201ENST00000638924 1588 ntBASIC21.28■■□□□ 1
TRBV5-3A0A0A0MS03 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRBV5-3A0A0A0MS03 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRBV5-3A0A0A0MS03 AC079630.1-202ENST00000618127 1840 ntBASIC21.28■■□□□ 1
TRBV5-3A0A0A0MS03 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.28■■□□□ 1
TRBV5-3A0A0A0MS03 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.28■■□□□ 1
TRBV5-3A0A0A0MS03 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.28■■□□□ 1
TRBV5-3A0A0A0MS03 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRBV5-3A0A0A0MS03 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRBV5-3A0A0A0MS03 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-3A0A0A0MS03 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-3A0A0A0MS03 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-3A0A0A0MS03 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-3A0A0A0MS03 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.27■■□□□ 1
TRBV5-3A0A0A0MS03 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-3A0A0A0MS03 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.27■■□□□ 1
TRBV5-3A0A0A0MS03 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-3A0A0A0MS03 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.27■■□□□ 1
TRBV5-3A0A0A0MS03 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-3A0A0A0MS03 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-3A0A0A0MS03 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TRBV5-3A0A0A0MS03 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV5-3A0A0A0MS03 AC120024.1-201ENST00000562672 995 ntBASIC21.26■□□□□ 0.99
TRBV5-3A0A0A0MS03 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TRBV5-3A0A0A0MS03 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV5-3A0A0A0MS03 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV5-3A0A0A0MS03 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV5-3A0A0A0MS03 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
TRBV5-3A0A0A0MS03 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV5-3A0A0A0MS03 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV5-3A0A0A0MS03 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.25■□□□□ 0.99
TRBV5-3A0A0A0MS03 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV5-3A0A0A0MS03 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.25■□□□□ 0.99
TRBV5-3A0A0A0MS03 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.25■□□□□ 0.99
TRBV5-3A0A0A0MS03 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV5-3A0A0A0MS03 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.25■□□□□ 0.99
TRBV5-3A0A0A0MS03 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV5-3A0A0A0MS03 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV5-3A0A0A0MS03 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV5-3A0A0A0MS03 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.24■□□□□ 0.99
TRBV5-3A0A0A0MS03 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.24■□□□□ 0.99
TRBV5-3A0A0A0MS03 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV5-3A0A0A0MS03 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.24■□□□□ 0.99
TRBV5-3A0A0A0MS03 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV5-3A0A0A0MS03 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV5-3A0A0A0MS03 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.24■□□□□ 0.99
TRBV5-3A0A0A0MS03 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.24■□□□□ 0.99
TRBV5-3A0A0A0MS03 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 AC127496.7-201ENST00000625110 1798 ntBASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV5-3A0A0A0MS03 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-3A0A0A0MS03 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.22■□□□□ 0.99
TRBV5-3A0A0A0MS03 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-3A0A0A0MS03 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-3A0A0A0MS03 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-3A0A0A0MS03 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-3A0A0A0MS03 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-3A0A0A0MS03 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-3A0A0A0MS03 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-3A0A0A0MS03 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.22■□□□□ 0.99
TRBV5-3A0A0A0MS03 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
TRBV5-3A0A0A0MS03 ESRRAP2-201ENST00000418437 1549 ntBASIC21.22■□□□□ 0.99
TRBV5-3A0A0A0MS03 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TRBV5-3A0A0A0MS03 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-3A0A0A0MS03 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV5-3A0A0A0MS03 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.22■□□□□ 0.99
TRBV5-3A0A0A0MS03 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.21■□□□□ 0.99
TRBV5-3A0A0A0MS03 DUX4L18-201ENST00000553347 1267 ntBASIC21.21■□□□□ 0.99
TRBV5-3A0A0A0MS03 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.21■□□□□ 0.99
TRBV5-3A0A0A0MS03 MIR4281-201ENST00000580852 62 ntBASIC21.21■□□□□ 0.99
TRBV5-3A0A0A0MS03 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.21■□□□□ 0.99
TRBV5-3A0A0A0MS03 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TRBV5-3A0A0A0MS03 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV5-3A0A0A0MS03 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV5-3A0A0A0MS03 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.2■□□□□ 0.99
TRBV5-3A0A0A0MS03 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-3A0A0A0MS03 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-3A0A0A0MS03 AC004448.1-201ENST00000458332 883 ntBASIC21.2■□□□□ 0.98
TRBV5-3A0A0A0MS03 AC139795.1-202ENST00000500444 432 ntBASIC21.2■□□□□ 0.98
TRBV5-3A0A0A0MS03 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV5-3A0A0A0MS03 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms