Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.77■□□□□ 0.76
LRRTM1Q86UE6 LINC00526-201ENST00000581067 1875 ntBASIC19.77■□□□□ 0.76
LRRTM1Q86UE6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
LRRTM1Q86UE6 GUSBP5-202ENST00000510805 1989 ntBASIC19.77■□□□□ 0.75
LRRTM1Q86UE6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
LRRTM1Q86UE6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LRRTM1Q86UE6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LRRTM1Q86UE6 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.76■□□□□ 0.75
LRRTM1Q86UE6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRRTM1Q86UE6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRTM1Q86UE6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LRRTM1Q86UE6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRTM1Q86UE6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRTM1Q86UE6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRTM1Q86UE6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRTM1Q86UE6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
LRRTM1Q86UE6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LRRTM1Q86UE6 RPS2P7-201ENST00000447334 885 ntBASIC19.75■□□□□ 0.75
LRRTM1Q86UE6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRRTM1Q86UE6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
LRRTM1Q86UE6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.75■□□□□ 0.75
LRRTM1Q86UE6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRTM1Q86UE6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRTM1Q86UE6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.75■□□□□ 0.75
LRRTM1Q86UE6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRTM1Q86UE6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRTM1Q86UE6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRTM1Q86UE6 AC009831.1-201ENST00000580420 1582 ntBASIC19.74■□□□□ 0.75
LRRTM1Q86UE6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.74■□□□□ 0.75
LRRTM1Q86UE6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRTM1Q86UE6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.74■□□□□ 0.75
LRRTM1Q86UE6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRTM1Q86UE6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRTM1Q86UE6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRTM1Q86UE6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRTM1Q86UE6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRTM1Q86UE6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRTM1Q86UE6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRRTM1Q86UE6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRTM1Q86UE6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRTM1Q86UE6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRTM1Q86UE6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRTM1Q86UE6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRTM1Q86UE6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRRTM1Q86UE6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRRTM1Q86UE6 MIR7108-201ENST00000614319 87 ntBASIC19.73■□□□□ 0.75
LRRTM1Q86UE6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRTM1Q86UE6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRTM1Q86UE6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRTM1Q86UE6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LRRTM1Q86UE6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LRRTM1Q86UE6 ECEL1P1-201ENST00000373592 1742 ntBASIC19.73■□□□□ 0.75
LRRTM1Q86UE6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRTM1Q86UE6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
LRRTM1Q86UE6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRTM1Q86UE6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.72■□□□□ 0.75
LRRTM1Q86UE6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRTM1Q86UE6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.72■□□□□ 0.75
LRRTM1Q86UE6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.72■□□□□ 0.75
LRRTM1Q86UE6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.72■□□□□ 0.75
LRRTM1Q86UE6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
LRRTM1Q86UE6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRTM1Q86UE6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRTM1Q86UE6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.71■□□□□ 0.75
LRRTM1Q86UE6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRTM1Q86UE6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LRRTM1Q86UE6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRTM1Q86UE6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
LRRTM1Q86UE6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.71■□□□□ 0.75
LRRTM1Q86UE6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.71■□□□□ 0.75
LRRTM1Q86UE6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRTM1Q86UE6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.71■□□□□ 0.75
LRRTM1Q86UE6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
LRRTM1Q86UE6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRTM1Q86UE6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LRRTM1Q86UE6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LRRTM1Q86UE6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRTM1Q86UE6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRTM1Q86UE6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRTM1Q86UE6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.7■□□□□ 0.74
LRRTM1Q86UE6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRTM1Q86UE6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRTM1Q86UE6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LRRTM1Q86UE6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRTM1Q86UE6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LRRTM1Q86UE6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRTM1Q86UE6 AC133552.2-201ENST00000619106 1032 ntBASIC19.7■□□□□ 0.74
LRRTM1Q86UE6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRTM1Q86UE6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LRRTM1Q86UE6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRTM1Q86UE6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
LRRTM1Q86UE6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRTM1Q86UE6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRTM1Q86UE6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRTM1Q86UE6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRTM1Q86UE6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRTM1Q86UE6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LRRTM1Q86UE6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRTM1Q86UE6 AL592295.1-201ENST00000400984 884 ntBASIC19.69■□□□□ 0.74
LRRTM1Q86UE6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms