Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC245100.8-202ENST00000629247 1058 ntBASIC20.72■□□□□ 0.91
SNRNP40Q96DI7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SNRNP40Q96DI7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP40Q96DI7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP40Q96DI7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SNRNP40Q96DI7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP40Q96DI7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SNRNP40Q96DI7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP40Q96DI7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNRNP40Q96DI7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNRNP40Q96DI7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNRNP40Q96DI7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.71■□□□□ 0.91
SNRNP40Q96DI7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.71■□□□□ 0.91
SNRNP40Q96DI7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.71■□□□□ 0.91
SNRNP40Q96DI7 C17orf82-201ENST00000623772 1530 ntBASIC20.71■□□□□ 0.91
SNRNP40Q96DI7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNRNP40Q96DI7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNRNP40Q96DI7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNRNP40Q96DI7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.7■□□□□ 0.91
SNRNP40Q96DI7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.7■□□□□ 0.9
SNRNP40Q96DI7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNRNP40Q96DI7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SNRNP40Q96DI7 AC233992.3-201ENST00000607491 485 ntBASIC20.7■□□□□ 0.9
SNRNP40Q96DI7 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.7■□□□□ 0.9
SNRNP40Q96DI7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
SNRNP40Q96DI7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.7■□□□□ 0.9
SNRNP40Q96DI7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNRNP40Q96DI7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SNRNP40Q96DI7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.69■□□□□ 0.9
SNRNP40Q96DI7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNRNP40Q96DI7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNRNP40Q96DI7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNRNP40Q96DI7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.69■□□□□ 0.9
SNRNP40Q96DI7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.69■□□□□ 0.9
SNRNP40Q96DI7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNRNP40Q96DI7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.68■□□□□ 0.9
SNRNP40Q96DI7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNRNP40Q96DI7 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.68■□□□□ 0.9
SNRNP40Q96DI7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNRNP40Q96DI7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNRNP40Q96DI7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.68■□□□□ 0.9
SNRNP40Q96DI7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNRNP40Q96DI7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.67■□□□□ 0.9
SNRNP40Q96DI7 BX842568.3-201ENST00000418104 571 ntBASIC20.67■□□□□ 0.9
SNRNP40Q96DI7 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.67■□□□□ 0.9
SNRNP40Q96DI7 AC006455.2-201ENST00000429931 906 ntBASIC20.67■□□□□ 0.9
SNRNP40Q96DI7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.67■□□□□ 0.9
SNRNP40Q96DI7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.67■□□□□ 0.9
SNRNP40Q96DI7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.67■□□□□ 0.9
SNRNP40Q96DI7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.67■□□□□ 0.9
SNRNP40Q96DI7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNRNP40Q96DI7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNRNP40Q96DI7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNRNP40Q96DI7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNRNP40Q96DI7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.67■□□□□ 0.9
SNRNP40Q96DI7 AL022069.1-201ENST00000568025 1636 ntBASIC20.67■□□□□ 0.9
SNRNP40Q96DI7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRNP40Q96DI7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRNP40Q96DI7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRNP40Q96DI7 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.66■□□□□ 0.9
SNRNP40Q96DI7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRNP40Q96DI7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRNP40Q96DI7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNRNP40Q96DI7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNRNP40Q96DI7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRNP40Q96DI7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRNP40Q96DI7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SNRNP40Q96DI7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SNRNP40Q96DI7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRNP40Q96DI7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SNRNP40Q96DI7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.65■□□□□ 0.9
SNRNP40Q96DI7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNRNP40Q96DI7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SNRNP40Q96DI7 MIR3181-201ENST00000578512 73 ntBASIC20.65■□□□□ 0.9
SNRNP40Q96DI7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNRNP40Q96DI7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRNP40Q96DI7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SNRNP40Q96DI7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNRNP40Q96DI7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNRNP40Q96DI7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNRNP40Q96DI7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNRNP40Q96DI7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNRNP40Q96DI7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.64■□□□□ 0.89
SNRNP40Q96DI7 AC090192.1-201ENST00000517740 490 ntBASIC20.64■□□□□ 0.89
SNRNP40Q96DI7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNRNP40Q96DI7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.64■□□□□ 0.89
SNRNP40Q96DI7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNRNP40Q96DI7 AC009086.3-201ENST00000623486 1008 ntBASIC20.64■□□□□ 0.89
SNRNP40Q96DI7 RARRES2P11-201ENST00000635158 484 ntBASIC20.64■□□□□ 0.89
SNRNP40Q96DI7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNRNP40Q96DI7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNRNP40Q96DI7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SNRNP40Q96DI7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRNP40Q96DI7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRNP40Q96DI7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.63■□□□□ 0.89
SNRNP40Q96DI7 AC034268.1-201ENST00000441047 882 ntBASIC20.63■□□□□ 0.89
SNRNP40Q96DI7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.63■□□□□ 0.89
SNRNP40Q96DI7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.63■□□□□ 0.89
SNRNP40Q96DI7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.63■□□□□ 0.89
SNRNP40Q96DI7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms