Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 CRZ1YNL027W 2037 nt5.86□□□□□ -1.47
SSL1Q04673 GUP2YPL189W 1830 nt5.85□□□□□ -1.47
SSL1Q04673 YHL017WYHL017W 1599 nt5.85□□□□□ -1.47
SSL1Q04673 AFG1YEL052W 1530 nt5.85□□□□□ -1.47
SSL1Q04673 FRS2YFL022C 1512 nt5.85□□□□□ -1.47
SSL1Q04673 RIT1YMR283C 1542 nt5.85□□□□□ -1.47
SSL1Q04673 ADE12YNL220W 1302 nt5.85□□□□□ -1.47
SSL1Q04673 YDR282CYDR282C 1245 nt5.85□□□□□ -1.47
SSL1Q04673 RRT2YBR246W 1164 nt5.85□□□□□ -1.47
SSL1Q04673 YMR155WYMR155W 1644 nt5.85□□□□□ -1.47
SSL1Q04673 CLN2YPL256C 1638 nt5.85□□□□□ -1.47
SSL1Q04673 SEC18YBR080C 2277 nt5.85□□□□□ -1.47
SSL1Q04673 GIT1YCR098C 1557 nt5.84□□□□□ -1.47
SSL1Q04673 PRP19YLL036C 1512 nt5.84□□□□□ -1.47
SSL1Q04673 YLR345WYLR345W 1530 nt5.84□□□□□ -1.47
SSL1Q04673 PYK2YOR347C 1521 nt5.84□□□□□ -1.47
SSL1Q04673 SIT4YDL047W 936 nt5.84□□□□□ -1.47
SSL1Q04673 CAF16YFL028C 870 nt5.84□□□□□ -1.47
SSL1Q04673 PHB1YGR132C 864 nt5.84□□□□□ -1.47
SSL1Q04673 CIR1YGR207C 786 nt5.84□□□□□ -1.47
SSL1Q04673 YJR096WYJR096W 849 nt5.84□□□□□ -1.47
SSL1Q04673 DAN1YJR150C 897 nt5.84□□□□□ -1.47
SSL1Q04673 CPR6YLR216C 1116 nt5.84□□□□□ -1.47
SSL1Q04673 YML131WYML131W 1098 nt5.84□□□□□ -1.47
SSL1Q04673 GLN1YPR035W 1113 nt5.84□□□□□ -1.47
SSL1Q04673 ANT1YPR128C 987 nt5.84□□□□□ -1.47
SSL1Q04673 YBR124WYBR124W 360 nt5.84□□□□□ -1.47
SSL1Q04673 YOL036WYOL036W 2286 nt5.84□□□□□ -1.47
SSL1Q04673 PAT1YCR077C 2391 nt5.84□□□□□ -1.48
SSL1Q04673 FET3YMR058W 1911 nt5.84□□□□□ -1.48
SSL1Q04673 PRP24YMR268C 1335 nt5.83□□□□□ -1.48
SSL1Q04673 UBC5YDR059C 447 nt5.83□□□□□ -1.48
SSL1Q04673 COX20YDR231C 618 nt5.83□□□□□ -1.48
SSL1Q04673 YGL258W-AYGL258W-A 234 nt5.83□□□□□ -1.48
SSL1Q04673 GAT4YIR013C 366 nt5.83□□□□□ -1.48
SSL1Q04673 ARG3YJL088W 1017 nt5.83□□□□□ -1.48
SSL1Q04673 YKR073CYKR073C 321 nt5.83□□□□□ -1.48
SSL1Q04673 CIN4YMR138W 576 nt5.83□□□□□ -1.48
SSL1Q04673 YNL174WYNL174W 573 nt5.83□□□□□ -1.48
SSL1Q04673 YOR289WYOR289W 756 nt5.83□□□□□ -1.48
SSL1Q04673 YBR292CYBR292C 372 nt5.83□□□□□ -1.48
SSL1Q04673 QNS1YHR074W 2145 nt5.83□□□□□ -1.48
SSL1Q04673 MNS1YJR131W 1650 nt5.82□□□□□ -1.48
SSL1Q04673 STE13YOR219C 2796 nt5.82□□□□□ -1.48
SSL1Q04673 YIL055CYIL055C 1884 nt5.82□□□□□ -1.48
SSL1Q04673 PRI2YKL045W 1587 nt5.82□□□□□ -1.48
SSL1Q04673 snR63snR63 255 nt5.82□□□□□ -1.48
SSL1Q04673 YER134CYER134C 537 nt5.82□□□□□ -1.48
SSL1Q04673 RPS31YLR167W 459 nt5.82□□□□□ -1.48
SSL1Q04673 ECM19YLR390W 339 nt5.82□□□□□ -1.48
SSL1Q04673 YOL163WYOL163W 510 nt5.82□□□□□ -1.48
SSL1Q04673 YOR062CYOR062C 807 nt5.82□□□□□ -1.48
SSL1Q04673 ENV7YPL236C 1095 nt5.82□□□□□ -1.48
SSL1Q04673 YPR123CYPR123C 435 nt5.82□□□□□ -1.48
SSL1Q04673 CNE1YAL058W 1509 nt5.82□□□□□ -1.48
SSL1Q04673 MNN5YJL186W 1761 nt5.82□□□□□ -1.48
SSL1Q04673 TEC1YBR083W 1461 nt5.82□□□□□ -1.48
SSL1Q04673 HXT3YDR345C 1704 nt5.82□□□□□ -1.48
SSL1Q04673 TPO3YPR156C 1869 nt5.81□□□□□ -1.48
SSL1Q04673 AIM6YDL237W 1173 nt5.81□□□□□ -1.48
SSL1Q04673 PHO92YDR374C 921 nt5.81□□□□□ -1.48
SSL1Q04673 UBC6YER100W 753 nt5.81□□□□□ -1.48
SSL1Q04673 RPN11YFR004W 921 nt5.81□□□□□ -1.48
SSL1Q04673 COG7YGL005C 840 nt5.81□□□□□ -1.48
SSL1Q04673 FMP48YGR052W 1110 nt5.81□□□□□ -1.48
SSL1Q04673 YGR204C-AYGR204C-A 114 nt5.81□□□□□ -1.48
SSL1Q04673 YLR307C-AYLR307C-A 264 nt5.81□□□□□ -1.48
SSL1Q04673 SHP1YBL058W 1272 nt5.81□□□□□ -1.48
SSL1Q04673 DOM34YNL001W 1161 nt5.81□□□□□ -1.48
SSL1Q04673 YPL113CYPL113C 1191 nt5.81□□□□□ -1.48
SSL1Q04673 RAD7YJR052W 1698 nt5.81□□□□□ -1.48
SSL1Q04673 GEX2YKR106W 1848 nt5.81□□□□□ -1.48
SSL1Q04673 AVO1YOL078W 3531 nt5.81□□□□□ -1.48
SSL1Q04673 CEF1YMR213W 1773 nt5.8□□□□□ -1.48
SSL1Q04673 SAC6YDR129C 1929 nt5.8□□□□□ -1.48
SSL1Q04673 GIC2YDR309C 1152 nt5.8□□□□□ -1.48
SSL1Q04673 SUP2tY(GUA)D 75 nt5.8□□□□□ -1.48
SSL1Q04673 SUP11tY(GUA)F1 75 nt5.8□□□□□ -1.48
SSL1Q04673 SUP6tY(GUA)F2 75 nt5.8□□□□□ -1.48
SSL1Q04673 SUP7tY(GUA)J1 75 nt5.8□□□□□ -1.48
SSL1Q04673 SUP4tY(GUA)J2 75 nt5.8□□□□□ -1.48
SSL1Q04673 SUP5tY(GUA)M1 75 nt5.8□□□□□ -1.48
SSL1Q04673 SUP8tY(GUA)M2 75 nt5.8□□□□□ -1.48
SSL1Q04673 SUP3tY(GUA)O 75 nt5.8□□□□□ -1.48
SSL1Q04673 MRS1YIR021W 1092 nt5.8□□□□□ -1.48
SSL1Q04673 RSM26YJR101W 801 nt5.8□□□□□ -1.48
SSL1Q04673 PNP1YLR209C 936 nt5.8□□□□□ -1.48
SSL1Q04673 YNR040WYNR040W 771 nt5.8□□□□□ -1.48
SSL1Q04673 MRPS5YBR251W 924 nt5.8□□□□□ -1.48
SSL1Q04673 UTP9YHR196W 1728 nt5.79□□□□□ -1.48
SSL1Q04673 GPB2YAL056W 2643 nt5.79□□□□□ -1.48
SSL1Q04673 CUS1YMR240C 1311 nt5.79□□□□□ -1.48
SSL1Q04673 ERG7YHR072W 2196 nt5.79□□□□□ -1.48
SSL1Q04673 YDL114WYDL114W 927 nt5.79□□□□□ -1.48
SSL1Q04673 PRS2YER099C 957 nt5.79□□□□□ -1.48
SSL1Q04673 CIS3YJL158C 684 nt5.79□□□□□ -1.48
SSL1Q04673 ICT1YLR099C 1185 nt5.79□□□□□ -1.48
SSL1Q04673 YLR326WYLR326W 723 nt5.79□□□□□ -1.48
SSL1Q04673 RUF5-1RUF5-1 710 nt5.79□□□□□ -1.48
SSL1Q04673 RUF5-2RUF5-2 710 nt5.79□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 56.6 ms