Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 KTI12YKL110C 942 nt4.49□□□□□ -1.69
CUP9P41817 COX17YLL009C 210 nt4.49□□□□□ -1.69
CUP9P41817 SCW10YMR305C 1170 nt4.49□□□□□ -1.69
CUP9P41817 ENV9YOR246C 993 nt4.49□□□□□ -1.69
CUP9P41817 AVO1YOL078W 3531 nt4.49□□□□□ -1.69
CUP9P41817 RRN3YKL125W 1884 nt4.49□□□□□ -1.69
CUP9P41817 UTP9YHR196W 1728 nt4.49□□□□□ -1.69
CUP9P41817 ATE1YGL017W 1512 nt4.48□□□□□ -1.69
CUP9P41817 YIR020W-AYIR020W-A 243 nt4.48□□□□□ -1.69
CUP9P41817 PWP1YLR196W 1731 nt4.48□□□□□ -1.69
CUP9P41817 SLT2YHR030C 1455 nt4.48□□□□□ -1.69
CUP9P41817 ZUO1YGR285C 1302 nt4.47□□□□□ -1.69
CUP9P41817 PSY4YBL046W 1326 nt4.47□□□□□ -1.69
CUP9P41817 ACS2YLR153C 2052 nt4.47□□□□□ -1.69
CUP9P41817 BIT2YBR270C 1638 nt4.47□□□□□ -1.69
CUP9P41817 YJL107CYJL107C 1164 nt4.47□□□□□ -1.69
CUP9P41817 MRPL39YML009C 213 nt4.47□□□□□ -1.69
CUP9P41817 NRM1YNR009W 750 nt4.47□□□□□ -1.69
CUP9P41817 CUE5YOR042W 1236 nt4.47□□□□□ -1.69
CUP9P41817 PRR1YKL116C 1557 nt4.47□□□□□ -1.69
CUP9P41817 MCX1YBR227C 1563 nt4.47□□□□□ -1.69
CUP9P41817 ELP3YPL086C 1674 nt4.47□□□□□ -1.69
CUP9P41817 MCH4YOL119C 1506 nt4.46□□□□□ -1.69
CUP9P41817 PRM1YNL279W 1986 nt4.46□□□□□ -1.7
CUP9P41817 PDI1YCL043C 1569 nt4.46□□□□□ -1.7
CUP9P41817 YIL171W-AYIL171W-A 453 nt4.46□□□□□ -1.7
CUP9P41817 YJL220WYJL220W 453 nt4.46□□□□□ -1.7
CUP9P41817 SFT2YBL102W 648 nt4.46□□□□□ -1.7
CUP9P41817 TRM10YOL093W 882 nt4.46□□□□□ -1.7
CUP9P41817 NUP116YMR047C 3342 nt4.46□□□□□ -1.7
CUP9P41817 FAA4YMR246W 2085 nt4.45□□□□□ -1.7
CUP9P41817 OCA5YHL029C 2040 nt4.45□□□□□ -1.7
CUP9P41817 FUI1YBL042C 1920 nt4.45□□□□□ -1.7
CUP9P41817 PHM8YER037W 966 nt4.45□□□□□ -1.7
CUP9P41817 DBP8YHR169W 1296 nt4.45□□□□□ -1.7
CUP9P41817 SYG1YIL047C 2709 nt4.45□□□□□ -1.7
CUP9P41817 HXT4YHR092C 1731 nt4.45□□□□□ -1.7
CUP9P41817 OPT1YJL212C 2400 nt4.45□□□□□ -1.7
CUP9P41817 HOS1YPR068C 1413 nt4.45□□□□□ -1.7
CUP9P41817 CTS1YLR286C 1689 nt4.45□□□□□ -1.7
CUP9P41817 SCM3YDL139C 672 nt4.44□□□□□ -1.7
CUP9P41817 RML2YEL050C 1182 nt4.44□□□□□ -1.7
CUP9P41817 XPT1YJR133W 630 nt4.44□□□□□ -1.7
CUP9P41817 ISU2YOR226C 471 nt4.44□□□□□ -1.7
CUP9P41817 NME1NME1 340 nt4.44□□□□□ -1.7
CUP9P41817 YPL199CYPL199C 723 nt4.44□□□□□ -1.7
CUP9P41817 NGR1YBR212W 2019 nt4.44□□□□□ -1.7
CUP9P41817 PUS1YPL212C 1635 nt4.43□□□□□ -1.7
CUP9P41817 UBX2YML013W 1755 nt4.43□□□□□ -1.7
CUP9P41817 NOP16YER002W 696 nt4.43□□□□□ -1.7
CUP9P41817 PRS1YKL181W 1284 nt4.43□□□□□ -1.7
CUP9P41817 RPP0YLR340W 939 nt4.43□□□□□ -1.7
CUP9P41817 SEC17YBL050W 879 nt4.43□□□□□ -1.7
CUP9P41817 PDR16YNL231C 1056 nt4.43□□□□□ -1.7
CUP9P41817 YIF1YNL263C 945 nt4.43□□□□□ -1.7
CUP9P41817 OAZ1YPL052W 879 nt4.43□□□□□ -1.7
CUP9P41817 RPO26YPR187W 468 nt4.43□□□□□ -1.7
CUP9P41817 PDB1YBR221C 1101 nt4.43□□□□□ -1.7
CUP9P41817 YAP1802YGR241C 1707 nt4.43□□□□□ -1.7
CUP9P41817 SIP5YMR140W 1470 nt4.43□□□□□ -1.7
CUP9P41817 YNL095CYNL095C 1929 nt4.42□□□□□ -1.7
CUP9P41817 ATM1YMR301C 2073 nt4.42□□□□□ -1.7
CUP9P41817 YDL027CYDL027C 1263 nt4.42□□□□□ -1.7
CUP9P41817 AIM10YER087W 1731 nt4.42□□□□□ -1.7
CUP9P41817 SCS2YER120W 735 nt4.42□□□□□ -1.7
CUP9P41817 YJR012CYJR012C 624 nt4.42□□□□□ -1.7
CUP9P41817 ETT1YOR051C 1239 nt4.42□□□□□ -1.7
CUP9P41817 MRI1YPR118W 1236 nt4.42□□□□□ -1.7
CUP9P41817 TDA6YPR157W 1404 nt4.42□□□□□ -1.7
CUP9P41817 UGA2YBR006W 1494 nt4.42□□□□□ -1.7
CUP9P41817 RBA50YDR527W 1320 nt4.42□□□□□ -1.7
CUP9P41817 NTH2YBR001C 2343 nt4.41□□□□□ -1.7
CUP9P41817 DBF4YDR052C 2115 nt4.41□□□□□ -1.7
CUP9P41817 DOA1YKL213C 2148 nt4.41□□□□□ -1.7
CUP9P41817 ECM33YBR078W 1290 nt4.41□□□□□ -1.7
CUP9P41817 CYK3YDL117W 2658 nt4.41□□□□□ -1.7
CUP9P41817 HRR25YPL204W 1485 nt4.41□□□□□ -1.7
CUP9P41817 CUE2YKL090W 1332 nt4.41□□□□□ -1.7
CUP9P41817 ADE3YGR204W 2841 nt4.4□□□□□ -1.7
CUP9P41817 THI5YFL058W 1023 nt4.4□□□□□ -1.71
CUP9P41817 NCS6YGL211W 1080 nt4.4□□□□□ -1.71
CUP9P41817 CTR2YHR175W 570 nt4.4□□□□□ -1.71
CUP9P41817 THI12YNL332W 1023 nt4.4□□□□□ -1.71
CUP9P41817 EMP46YLR080W 1335 nt4.4□□□□□ -1.71
CUP9P41817 HES1YOR237W 1305 nt4.4□□□□□ -1.71
CUP9P41817 SRV2YNL138W 1581 nt4.4□□□□□ -1.71
CUP9P41817 SIT1YEL065W 1887 nt4.39□□□□□ -1.71
CUP9P41817 EXO1YOR033C 2109 nt4.39□□□□□ -1.71
CUP9P41817 YLF2YHL014C 1218 nt4.39□□□□□ -1.71
CUP9P41817 CCS1YMR038C 750 nt4.39□□□□□ -1.71
CUP9P41817 YNL174WYNL174W 573 nt4.39□□□□□ -1.71
CUP9P41817 SEC18YBR080C 2277 nt4.39□□□□□ -1.71
CUP9P41817 FRE3YOR381W 2136 nt4.39□□□□□ -1.71
CUP9P41817 PUT1YLR142W 1431 nt4.38□□□□□ -1.71
CUP9P41817 NGL2YMR285C 1548 nt4.38□□□□□ -1.71
CUP9P41817 IPK1YDR315C 846 nt4.38□□□□□ -1.71
CUP9P41817 MRF1YGL143C 1242 nt4.38□□□□□ -1.71
CUP9P41817 ASA1YPR085C 1332 nt4.38□□□□□ -1.71
CUP9P41817 BNA5YLR231C 1362 nt4.38□□□□□ -1.71
CUP9P41817 YMR111CYMR111C 1389 nt4.38□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 34.7 ms