Protein–RNA interactions for Protein: P34228

SEF1, Putative transcription factor SEF1, yeastyeast

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEF1P34228 RPS9AYPL081W 594 nt5.25□□□□□ -1.57
SEF1P34228 RPN7YPR108W 1290 nt5.25□□□□□ -1.57
SEF1P34228 ARR3YPR201W 1215 nt5.25□□□□□ -1.57
SEF1P34228 KEX2YNL238W 2445 nt5.25□□□□□ -1.57
SEF1P34228 ATG1YGL180W 2694 nt5.24□□□□□ -1.57
SEF1P34228 YGL118CYGL118C 438 nt5.24□□□□□ -1.57
SEF1P34228 RRP4YHR069C 1080 nt5.24□□□□□ -1.57
SEF1P34228 PAN6YIL145C 930 nt5.24□□□□□ -1.57
SEF1P34228 TAF4YMR005W 1167 nt5.24□□□□□ -1.57
SEF1P34228 NCE103YNL036W 666 nt5.24□□□□□ -1.57
SEF1P34228 AIM41YOR215C 558 nt5.24□□□□□ -1.57
SEF1P34228 MRPL36YBR122C 534 nt5.24□□□□□ -1.57
SEF1P34228 GAS3YMR215W 1575 nt5.24□□□□□ -1.57
SEF1P34228 APE3YBR286W 1614 nt5.23□□□□□ -1.57
SEF1P34228 YDL121CYDL121C 450 nt5.23□□□□□ -1.57
SEF1P34228 URA3YEL021W 804 nt5.23□□□□□ -1.57
SEF1P34228 UBC6YER100W 753 nt5.23□□□□□ -1.57
SEF1P34228 YFR052C-AYFR052C-A 306 nt5.23□□□□□ -1.57
SEF1P34228 SPO74YGL170C 1242 nt5.23□□□□□ -1.57
SEF1P34228 HAP2YGL237C 798 nt5.23□□□□□ -1.57
SEF1P34228 YJL107CYJL107C 1164 nt5.23□□□□□ -1.57
SEF1P34228 YET2YMR040W 483 nt5.23□□□□□ -1.57
SEF1P34228 YOR292CYOR292C 930 nt5.23□□□□□ -1.57
SEF1P34228 YPL113CYPL113C 1191 nt5.23□□□□□ -1.57
SEF1P34228 YCL041CYCL041C 495 nt5.23□□□□□ -1.57
SEF1P34228 RAD3YER171W 2337 nt5.23□□□□□ -1.57
SEF1P34228 YDR109CYDR109C 2148 nt5.23□□□□□ -1.57
SEF1P34228 YAP1801YHR161C 1914 nt5.23□□□□□ -1.57
SEF1P34228 CLA4YNL298W 2529 nt5.22□□□□□ -1.57
SEF1P34228 RAI1YGL246C 1164 nt5.22□□□□□ -1.57
SEF1P34228 IPI1YHR085W 1005 nt5.22□□□□□ -1.57
SEF1P34228 MAD2YJL030W 591 nt5.22□□□□□ -1.57
SEF1P34228 YJL193WYJL193W 1209 nt5.22□□□□□ -1.57
SEF1P34228 GTR1YML121W 933 nt5.22□□□□□ -1.57
SEF1P34228 YBL029WYBL029W 1131 nt5.22□□□□□ -1.57
SEF1P34228 CKA2YOR061W 1020 nt5.22□□□□□ -1.57
SEF1P34228 ENV9YOR246C 993 nt5.22□□□□□ -1.57
SEF1P34228 DBF2YGR092W 1719 nt5.22□□□□□ -1.57
SEF1P34228 IML2YJL082W 2196 nt5.22□□□□□ -1.57
SEF1P34228 DHH1YDL160C 1521 nt5.22□□□□□ -1.57
SEF1P34228 MAD3YJL013C 1548 nt5.22□□□□□ -1.57
SEF1P34228 CLP1YOR250C 1338 nt5.22□□□□□ -1.57
SEF1P34228 HER2YMR293C 1395 nt5.21□□□□□ -1.58
SEF1P34228 HXT3YDR345C 1704 nt5.21□□□□□ -1.58
SEF1P34228 YDL114WYDL114W 927 nt5.21□□□□□ -1.58
SEF1P34228 ARP10YDR106W 855 nt5.21□□□□□ -1.58
SEF1P34228 RHO3YIL118W 696 nt5.21□□□□□ -1.58
SEF1P34228 DJP1YIR004W 1299 nt5.21□□□□□ -1.58
SEF1P34228 PRM10YJL108C 1152 nt5.21□□□□□ -1.58
SEF1P34228 MRPL13YKR006C 795 nt5.21□□□□□ -1.58
SEF1P34228 YNR068CYNR068C 819 nt5.21□□□□□ -1.58
SEF1P34228 YPR109WYPR109W 885 nt5.21□□□□□ -1.58
SEF1P34228 RSM23YGL129C 1353 nt5.2□□□□□ -1.58
SEF1P34228 MST1YKL194C 1389 nt5.2□□□□□ -1.58
SEF1P34228 GSY2YLR258W 2118 nt5.2□□□□□ -1.58
SEF1P34228 PRP46YPL151C 1356 nt5.2□□□□□ -1.58
SEF1P34228 RRP45YDR280W 918 nt5.2□□□□□ -1.58
SEF1P34228 RPL7AYGL076C 735 nt5.2□□□□□ -1.58
SEF1P34228 RPL7BYPL198W 735 nt5.2□□□□□ -1.58
SEF1P34228 VPS4YPR173C 1314 nt5.2□□□□□ -1.58
SEF1P34228 YPK2YMR104C 2034 nt5.19□□□□□ -1.58
SEF1P34228 ACC1YNR016C 6702 nt5.19□□□□□ -1.58
SEF1P34228 ARB1YER036C 1833 nt5.19□□□□□ -1.58
SEF1P34228 YCL065WYCL065W 369 nt5.19□□□□□ -1.58
SEF1P34228 YGR011WYGR011W 327 nt5.19□□□□□ -1.58
SEF1P34228 RME1YGR044C 903 nt5.19□□□□□ -1.58
SEF1P34228 PHO86YJL117W 936 nt5.19□□□□□ -1.58
SEF1P34228 YJU3YKL094W 942 nt5.19□□□□□ -1.58
SEF1P34228 PDR16YNL231C 1056 nt5.19□□□□□ -1.58
SEF1P34228 ARR1YPR199C 885 nt5.19□□□□□ -1.58
SEF1P34228 DXO1YDR370C 1329 nt5.19□□□□□ -1.58
SEF1P34228 UBA1YKL210W 3075 nt5.18□□□□□ -1.58
SEF1P34228 VTH1YIL173W 4650 nt5.18□□□□□ -1.58
SEF1P34228 VTH2YJL222W 4650 nt5.18□□□□□ -1.58
SEF1P34228 RIM101YHL027W 1878 nt5.18□□□□□ -1.58
SEF1P34228 YDR154CYDR154C 351 nt5.18□□□□□ -1.58
SEF1P34228 YRA1YDR381W 681 nt5.18□□□□□ -1.58
SEF1P34228 YOR289WYOR289W 756 nt5.18□□□□□ -1.58
SEF1P34228 YOR342CYOR342C 960 nt5.18□□□□□ -1.58
SEF1P34228 ISR1YPR106W 1332 nt5.18□□□□□ -1.58
SEF1P34228 YME1YPR024W 2244 nt5.17□□□□□ -1.58
SEF1P34228 EPS1YIL005W 2106 nt5.17□□□□□ -1.58
SEF1P34228 CLB1YGR108W 1416 nt5.17□□□□□ -1.58
SEF1P34228 MEC3YLR288C 1425 nt5.17□□□□□ -1.58
SEF1P34228 YLL017WYLL017W 312 nt5.17□□□□□ -1.58
SEF1P34228 YLR283WYLR283W 945 nt5.17□□□□□ -1.58
SEF1P34228 YGP1YNL160W 1065 nt5.17□□□□□ -1.58
SEF1P34228 YPL062WYPL062W 405 nt5.17□□□□□ -1.58
SEF1P34228 UBA3YPR066W 900 nt5.17□□□□□ -1.58
SEF1P34228 snR32snR32 188 nt5.17□□□□□ -1.58
SEF1P34228 YRF1-4YLR466W 4149 nt5.17□□□□□ -1.58
SEF1P34228 AMD1YML035C 2433 nt5.16□□□□□ -1.58
SEF1P34228 RRN3YKL125W 1884 nt5.16□□□□□ -1.58
SEF1P34228 SHM1YBR263W 1473 nt5.16□□□□□ -1.58
SEF1P34228 INO2YDR123C 915 nt5.16□□□□□ -1.58
SEF1P34228 GIR2YDR152W 798 nt5.16□□□□□ -1.58
SEF1P34228 YER134CYER134C 537 nt5.16□□□□□ -1.58
SEF1P34228 YAL056C-AYAL056C-A 351 nt5.16□□□□□ -1.58
SEF1P34228 STM1YLR150W 822 nt5.16□□□□□ -1.58
SEF1P34228 ARG8YOL140W 1272 nt5.16□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms