Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 COR1YBL045C 1374 nt6.7□□□□□ -1.34
MSH3P25336 YMR027WYMR027W 1413 nt6.7□□□□□ -1.34
MSH3P25336 CLC1YGR167W 702 nt6.7□□□□□ -1.34
MSH3P25336 ECM14YHR132C 1293 nt6.7□□□□□ -1.34
MSH3P25336 MRS1YIR021W 1092 nt6.7□□□□□ -1.34
MSH3P25336 YLR225CYLR225C 1224 nt6.7□□□□□ -1.34
MSH3P25336 YLR365WYLR365W 333 nt6.7□□□□□ -1.34
MSH3P25336 OSW5YMR148W 447 nt6.7□□□□□ -1.34
MSH3P25336 SFB3YHR098C 2790 nt6.7□□□□□ -1.34
MSH3P25336 ALT1YLR089C 1779 nt6.69□□□□□ -1.34
MSH3P25336 OSW2YLR054C 2175 nt6.69□□□□□ -1.34
MSH3P25336 IRC6YFR043C 714 nt6.69□□□□□ -1.34
MSH3P25336 LAC1YKL008C 1257 nt6.69□□□□□ -1.34
MSH3P25336 YMR122CYMR122C 375 nt6.69□□□□□ -1.34
MSH3P25336 YAP7YOL028C 738 nt6.69□□□□□ -1.34
MSH3P25336 ARG8YOL140W 1272 nt6.69□□□□□ -1.34
MSH3P25336 CWC27YPL064C 906 nt6.69□□□□□ -1.34
MSH3P25336 TEP1YNL128W 1305 nt6.69□□□□□ -1.34
MSH3P25336 MNN5YJL186W 1761 nt6.68□□□□□ -1.34
MSH3P25336 PEX19YDL065C 1029 nt6.68□□□□□ -1.34
MSH3P25336 KRE28YDR532C 1158 nt6.68□□□□□ -1.34
MSH3P25336 POP6YGR030C 477 nt6.68□□□□□ -1.34
MSH3P25336 YIR020W-AYIR020W-A 243 nt6.68□□□□□ -1.34
MSH3P25336 YKR015CYKR015C 1707 nt6.67□□□□□ -1.34
MSH3P25336 JIP4YDR475C 2631 nt6.67□□□□□ -1.34
MSH3P25336 CST6YIL036W 1764 nt6.67□□□□□ -1.34
MSH3P25336 KKQ8YKL168C 2175 nt6.67□□□□□ -1.34
MSH3P25336 RRG1YDR065W 1098 nt6.67□□□□□ -1.34
MSH3P25336 RPT3YDR394W 1287 nt6.67□□□□□ -1.34
MSH3P25336 GAL83YER027C 1254 nt6.67□□□□□ -1.34
MSH3P25336 Q0142Q0142 177 nt6.67□□□□□ -1.34
MSH3P25336 tR(ACG)DtR(ACG)D 73 nt6.67□□□□□ -1.34
MSH3P25336 tR(ACG)EtR(ACG)E 73 nt6.67□□□□□ -1.34
MSH3P25336 tR(ACG)KtR(ACG)K 73 nt6.67□□□□□ -1.34
MSH3P25336 tR(ACG)LtR(ACG)L 73 nt6.67□□□□□ -1.34
MSH3P25336 tR(ACG)OtR(ACG)O 73 nt6.67□□□□□ -1.34
MSH3P25336 PAN5YHR063C 1140 nt6.67□□□□□ -1.34
MSH3P25336 DAL2YIR029W 1032 nt6.67□□□□□ -1.34
MSH3P25336 MTR2YKL186C 555 nt6.67□□□□□ -1.34
MSH3P25336 SCS7YMR272C 1155 nt6.67□□□□□ -1.34
MSH3P25336 YOL163WYOL163W 510 nt6.67□□□□□ -1.34
MSH3P25336 LAP2YNL045W 2016 nt6.67□□□□□ -1.34
MSH3P25336 YLL067CYLL067C 3618 nt6.67□□□□□ -1.34
MSH3P25336 FLC3YGL139W 2409 nt6.66□□□□□ -1.34
MSH3P25336 HIM1YDR317W 1245 nt6.66□□□□□ -1.34
MSH3P25336 MOB2YFL034C-B 864 nt6.66□□□□□ -1.34
MSH3P25336 SKI6YGR195W 741 nt6.66□□□□□ -1.34
MSH3P25336 CTK2YJL006C 972 nt6.66□□□□□ -1.34
MSH3P25336 YLR184WYLR184W 348 nt6.66□□□□□ -1.34
MSH3P25336 YLR307C-AYLR307C-A 264 nt6.66□□□□□ -1.34
MSH3P25336 NOP13YNL175C 1212 nt6.66□□□□□ -1.34
MSH3P25336 YOR062CYOR062C 807 nt6.66□□□□□ -1.34
MSH3P25336 RSC2YLR357W 2670 nt6.65□□□□□ -1.34
MSH3P25336 MDM31YHR194W 1740 nt6.65□□□□□ -1.34
MSH3P25336 CDC34YDR054C 888 nt6.65□□□□□ -1.34
MSH3P25336 TFG2YGR005C 1203 nt6.65□□□□□ -1.34
MSH3P25336 BCY1YIL033C 1251 nt6.65□□□□□ -1.34
MSH3P25336 TSA1YML028W 591 nt6.65□□□□□ -1.34
MSH3P25336 ECM7YLR443W 1347 nt6.65□□□□□ -1.35
MSH3P25336 TRP5YGL026C 2124 nt6.65□□□□□ -1.35
MSH3P25336 FAT3YKL187C 2253 nt6.65□□□□□ -1.35
MSH3P25336 HXT7YDR342C 1713 nt6.64□□□□□ -1.35
MSH3P25336 HXT6YDR343C 1713 nt6.64□□□□□ -1.35
MSH3P25336 MAK31YCR020C-A 267 nt6.64□□□□□ -1.35
MSH3P25336 YET3YDL072C 612 nt6.64□□□□□ -1.35
MSH3P25336 COX20YDR231C 618 nt6.64□□□□□ -1.35
MSH3P25336 YEL068CYEL068C 333 nt6.64□□□□□ -1.35
MSH3P25336 NCS6YGL211W 1080 nt6.64□□□□□ -1.35
MSH3P25336 YGL262WYGL262W 528 nt6.64□□□□□ -1.35
MSH3P25336 ORM2YLR350W 651 nt6.64□□□□□ -1.35
MSH3P25336 GLN1YPR035W 1113 nt6.64□□□□□ -1.35
MSH3P25336 HST3YOR025W 1344 nt6.64□□□□□ -1.35
MSH3P25336 BRL1YHR036W 1416 nt6.64□□□□□ -1.35
MSH3P25336 GIP2YER054C 1647 nt6.63□□□□□ -1.35
MSH3P25336 FRS2YFL022C 1512 nt6.63□□□□□ -1.35
MSH3P25336 KSS1YGR040W 1107 nt6.63□□□□□ -1.35
MSH3P25336 CIR1YGR207C 786 nt6.63□□□□□ -1.35
MSH3P25336 TNA1YGR260W 1605 nt6.63□□□□□ -1.35
MSH3P25336 YAP1801YHR161C 1914 nt6.63□□□□□ -1.35
MSH3P25336 RPE1YJL121C 717 nt6.63□□□□□ -1.35
MSH3P25336 TDH2YJR009C 999 nt6.63□□□□□ -1.35
MSH3P25336 MDH1YKL085W 1005 nt6.63□□□□□ -1.35
MSH3P25336 UBA1YKL210W 3075 nt6.63□□□□□ -1.35
MSH3P25336 YLR118CYLR118C 684 nt6.63□□□□□ -1.35
MSH3P25336 CSM3YMR048W 954 nt6.63□□□□□ -1.35
MSH3P25336 YNL174WYNL174W 573 nt6.63□□□□□ -1.35
MSH3P25336 KEX2YNL238W 2445 nt6.63□□□□□ -1.35
MSH3P25336 RUF5-1RUF5-1 710 nt6.63□□□□□ -1.35
MSH3P25336 RUF5-2RUF5-2 710 nt6.63□□□□□ -1.35
MSH3P25336 CLP1YOR250C 1338 nt6.63□□□□□ -1.35
MSH3P25336 VPS4YPR173C 1314 nt6.63□□□□□ -1.35
MSH3P25336 RRT2YBR246W 1164 nt6.63□□□□□ -1.35
MSH3P25336 SET4YJL105W 1683 nt6.62□□□□□ -1.35
MSH3P25336 YHL012WYHL012W 1482 nt6.62□□□□□ -1.35
MSH3P25336 YDL023CYDL023C 321 nt6.62□□□□□ -1.35
MSH3P25336 INO2YDR123C 915 nt6.62□□□□□ -1.35
MSH3P25336 RPN11YFR004W 921 nt6.62□□□□□ -1.35
MSH3P25336 LDS1YAL018C 978 nt6.62□□□□□ -1.35
MSH3P25336 SFK1YKL051W 1062 nt6.62□□□□□ -1.35
MSH3P25336 HRT3YLR097C 1035 nt6.62□□□□□ -1.35
Retrieved 100 of 7,029 protein–RNA pairs in 55.2 ms