Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC14.16□□□□□ -0.14
KRTAP3-3Q9BYR6 AL512637.1-201ENST00000439523 1231 ntBASIC14.16□□□□□ -0.14
KRTAP3-3Q9BYR6 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC14.16□□□□□ -0.14
KRTAP3-3Q9BYR6 ATP6AP2-204ENST00000447485 1254 ntTSL 5 BASIC14.16□□□□□ -0.14
KRTAP3-3Q9BYR6 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KRTAP3-3Q9BYR6 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KRTAP3-3Q9BYR6 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KRTAP3-3Q9BYR6 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC14.16□□□□□ -0.14
KRTAP3-3Q9BYR6 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC14.16□□□□□ -0.14
KRTAP3-3Q9BYR6 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KRTAP3-3Q9BYR6 AC068733.1-201ENST00000532430 1288 ntTSL 2 BASIC14.16□□□□□ -0.14
KRTAP3-3Q9BYR6 MEG8-208ENST00000553465 1176 ntTSL 5 BASIC14.16□□□□□ -0.14
KRTAP3-3Q9BYR6 AP000866.2-201ENST00000504932 1493 ntTSL 2 BASIC14.16□□□□□ -0.14
KRTAP3-3Q9BYR6 AC095050.2-201ENST00000510748 1458 ntBASIC14.16□□□□□ -0.14
KRTAP3-3Q9BYR6 QRSL1P3-201ENST00000552666 1316 ntBASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 AC010980.2-201ENST00000587099 1412 ntBASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 TCEAL1-202ENST00000372625 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 AC002076.1-201ENST00000435257 527 ntTSL 2 BASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 AP001885.1-202ENST00000444002 1255 ntBASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 AL049840.6-202ENST00000603373 279 ntBASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 AL139022.2-201ENST00000606934 443 ntBASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 AL122008.3-201ENST00000412483 1723 ntTSL 2 BASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KRTAP3-3Q9BYR6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
KRTAP3-3Q9BYR6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRTAP3-3Q9BYR6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRTAP3-3Q9BYR6 TRAF3IP3-201ENST00000367023 1065 ntTSL 3 BASIC14.14□□□□□ -0.15
KRTAP3-3Q9BYR6 AC092447.3-201ENST00000426027 686 ntBASIC14.14□□□□□ -0.15
KRTAP3-3Q9BYR6 MORF4L1P7-201ENST00000426038 703 ntBASIC14.14□□□□□ -0.15
KRTAP3-3Q9BYR6 MTCO3P30-201ENST00000426425 670 ntBASIC14.14□□□□□ -0.15
KRTAP3-3Q9BYR6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.14□□□□□ -0.15
KRTAP3-3Q9BYR6 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC14.14□□□□□ -0.15
KRTAP3-3Q9BYR6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC14.14□□□□□ -0.15
KRTAP3-3Q9BYR6 AC116348.1-201ENST00000562525 528 ntTSL 3 BASIC14.14□□□□□ -0.15
KRTAP3-3Q9BYR6 TTR-204ENST00000610404 1040 ntTSL 5 BASIC14.14□□□□□ -0.15
KRTAP3-3Q9BYR6 LINC02246-207ENST00000630354 524 ntTSL 5 BASIC14.14□□□□□ -0.15
KRTAP3-3Q9BYR6 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRTAP3-3Q9BYR6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 CBR3-AS1-204ENST00000453159 1499 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 MTCO1P21-201ENST00000416634 589 ntBASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 AP000547.1-201ENST00000454360 617 ntBASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 OR4A46P-201ENST00000527255 933 ntBASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 AC124947.1-201ENST00000552835 814 ntTSL 3 BASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 AC027176.2-201ENST00000559166 746 ntBASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 C2orf69P4-201ENST00000565394 541 ntBASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 AC005771.1-201ENST00000585581 349 ntBASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 AC135507.1-201ENST00000607214 561 ntBASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 AC005609.4-201ENST00000625071 447 ntBASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KRTAP3-3Q9BYR6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRTAP3-3Q9BYR6 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.12□□□□□ -0.15
KRTAP3-3Q9BYR6 ADAM10-203ENST00000402627 861 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KRTAP3-3Q9BYR6 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC14.12□□□□□ -0.15
KRTAP3-3Q9BYR6 AL513285.1-201ENST00000423187 432 ntTSL 3 BASIC14.12□□□□□ -0.15
KRTAP3-3Q9BYR6 MTND1P4-201ENST00000435196 415 ntBASIC14.12□□□□□ -0.15
KRTAP3-3Q9BYR6 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
KRTAP3-3Q9BYR6 AP001636.2-201ENST00000525517 696 ntBASIC14.12□□□□□ -0.15
KRTAP3-3Q9BYR6 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC14.12□□□□□ -0.15
KRTAP3-3Q9BYR6 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC14.12□□□□□ -0.15
KRTAP3-3Q9BYR6 LINC00648-204ENST00000557749 443 ntTSL 5 BASIC14.12□□□□□ -0.15
KRTAP3-3Q9BYR6 CASC19-208ENST00000641056 1292 ntBASIC14.12□□□□□ -0.15
KRTAP3-3Q9BYR6 CASC19-227ENST00000641411 1285 ntBASIC14.12□□□□□ -0.15
KRTAP3-3Q9BYR6 MAPK10-350ENST00000641777 965 ntBASIC14.12□□□□□ -0.15
KRTAP3-3Q9BYR6 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRTAP3-3Q9BYR6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
KRTAP3-3Q9BYR6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRTAP3-3Q9BYR6 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRTAP3-3Q9BYR6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
KRTAP3-3Q9BYR6 AC115285.1-201ENST00000424879 736 ntBASIC14.11□□□□□ -0.15
KRTAP3-3Q9BYR6 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC14.11□□□□□ -0.15
KRTAP3-3Q9BYR6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC14.11□□□□□ -0.15
KRTAP3-3Q9BYR6 AC111000.5-201ENST00000506559 1178 ntBASIC14.11□□□□□ -0.15
KRTAP3-3Q9BYR6 AC112206.4-201ENST00000515142 405 ntBASIC14.11□□□□□ -0.15
KRTAP3-3Q9BYR6 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
KRTAP3-3Q9BYR6 AC020978.7-201ENST00000575953 1187 ntBASIC14.11□□□□□ -0.15
KRTAP3-3Q9BYR6 AC009269.6-201ENST00000621778 588 ntBASIC14.11□□□□□ -0.15
KRTAP3-3Q9BYR6 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC14.11□□□□□ -0.15
KRTAP3-3Q9BYR6 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC14.11□□□□□ -0.15
KRTAP3-3Q9BYR6 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC14.11□□□□□ -0.15
KRTAP3-3Q9BYR6 AC006927.3-201ENST00000638789 384 ntBASIC14.11□□□□□ -0.15
KRTAP3-3Q9BYR6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 247.2 ms