Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf7Q8BTV2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf7Q8BTV2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf7Q8BTV2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf7Q8BTV2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cpsf7Q8BTV2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf7Q8BTV2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf7Q8BTV2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf7Q8BTV2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf7Q8BTV2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf7Q8BTV2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Cpsf7Q8BTV2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cpsf7Q8BTV2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpsf7Q8BTV2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Cpsf7Q8BTV2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpsf7Q8BTV2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf7Q8BTV2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.13■□□□□ 0.97
Cpsf7Q8BTV2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf7Q8BTV2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.13■□□□□ 0.97
Cpsf7Q8BTV2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf7Q8BTV2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cpsf7Q8BTV2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf7Q8BTV2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf7Q8BTV2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.12■□□□□ 0.97
Cpsf7Q8BTV2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf7Q8BTV2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf7Q8BTV2 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.12■□□□□ 0.97
Cpsf7Q8BTV2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf7Q8BTV2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf7Q8BTV2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf7Q8BTV2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf7Q8BTV2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf7Q8BTV2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf7Q8BTV2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf7Q8BTV2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf7Q8BTV2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Cpsf7Q8BTV2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf7Q8BTV2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cpsf7Q8BTV2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf7Q8BTV2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf7Q8BTV2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Cpsf7Q8BTV2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf7Q8BTV2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf7Q8BTV2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf7Q8BTV2 Gm44428-201ENSMUST00000204474 874 ntBASIC21.1■□□□□ 0.97
Cpsf7Q8BTV2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.1■□□□□ 0.97
Cpsf7Q8BTV2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.1■□□□□ 0.97
Cpsf7Q8BTV2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cpsf7Q8BTV2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf7Q8BTV2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf7Q8BTV2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf7Q8BTV2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf7Q8BTV2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf7Q8BTV2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Cpsf7Q8BTV2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf7Q8BTV2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf7Q8BTV2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpsf7Q8BTV2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpsf7Q8BTV2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Cpsf7Q8BTV2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cpsf7Q8BTV2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpsf7Q8BTV2 Mir6538-201ENSMUST00000183713 110 ntBASIC21.07■□□□□ 0.96
Cpsf7Q8BTV2 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.07■□□□□ 0.96
Cpsf7Q8BTV2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cpsf7Q8BTV2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpsf7Q8BTV2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cpsf7Q8BTV2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cpsf7Q8BTV2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf7Q8BTV2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf7Q8BTV2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf7Q8BTV2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.05■□□□□ 0.96
Cpsf7Q8BTV2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf7Q8BTV2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cpsf7Q8BTV2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cpsf7Q8BTV2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf7Q8BTV2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf7Q8BTV2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf7Q8BTV2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.05■□□□□ 0.96
Cpsf7Q8BTV2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf7Q8BTV2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf7Q8BTV2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Cpsf7Q8BTV2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf7Q8BTV2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf7Q8BTV2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.04■□□□□ 0.96
Cpsf7Q8BTV2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cpsf7Q8BTV2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf7Q8BTV2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf7Q8BTV2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Cpsf7Q8BTV2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cpsf7Q8BTV2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf7Q8BTV2 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.03■□□□□ 0.96
Cpsf7Q8BTV2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf7Q8BTV2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf7Q8BTV2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf7Q8BTV2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf7Q8BTV2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf7Q8BTV2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf7Q8BTV2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf7Q8BTV2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cpsf7Q8BTV2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms