Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv13-2A0A140T8N6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv13-2A0A140T8N6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv13-2A0A140T8N6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC14.72□□□□□ -0.05
Trbv13-2A0A140T8N6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC14.71□□□□□ -0.05
Trbv13-2A0A140T8N6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-2A0A140T8N6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-2A0A140T8N6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-2A0A140T8N6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-2A0A140T8N6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-2A0A140T8N6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-2A0A140T8N6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-2A0A140T8N6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv13-2A0A140T8N6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv13-2A0A140T8N6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
Trbv13-2A0A140T8N6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-2A0A140T8N6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-2A0A140T8N6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-2A0A140T8N6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-2A0A140T8N6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-2A0A140T8N6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.7□□□□□ -0.06
Trbv13-2A0A140T8N6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.7□□□□□ -0.06
Trbv13-2A0A140T8N6 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.7□□□□□ -0.06
Trbv13-2A0A140T8N6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-2A0A140T8N6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-2A0A140T8N6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-2A0A140T8N6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-2A0A140T8N6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-2A0A140T8N6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-2A0A140T8N6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trbv13-2A0A140T8N6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-2A0A140T8N6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-2A0A140T8N6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.69□□□□□ -0.06
Trbv13-2A0A140T8N6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.69□□□□□ -0.06
Trbv13-2A0A140T8N6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-2A0A140T8N6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trbv13-2A0A140T8N6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trbv13-2A0A140T8N6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-2A0A140T8N6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-2A0A140T8N6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-2A0A140T8N6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-2A0A140T8N6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
Trbv13-2A0A140T8N6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trbv13-2A0A140T8N6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-2A0A140T8N6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-2A0A140T8N6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trbv13-2A0A140T8N6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-2A0A140T8N6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC14.68□□□□□ -0.06
Trbv13-2A0A140T8N6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-2A0A140T8N6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.68□□□□□ -0.06
Trbv13-2A0A140T8N6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-2A0A140T8N6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-2A0A140T8N6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-2A0A140T8N6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-2A0A140T8N6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-2A0A140T8N6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-2A0A140T8N6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trbv13-2A0A140T8N6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-2A0A140T8N6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-2A0A140T8N6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-2A0A140T8N6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.67□□□□□ -0.06
Trbv13-2A0A140T8N6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-2A0A140T8N6 Gm5921-201ENSMUST00000075898 882 ntBASIC14.67□□□□□ -0.06
Trbv13-2A0A140T8N6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trbv13-2A0A140T8N6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-2A0A140T8N6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-2A0A140T8N6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trbv13-2A0A140T8N6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv13-2A0A140T8N6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-2A0A140T8N6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv13-2A0A140T8N6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trbv13-2A0A140T8N6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trbv13-2A0A140T8N6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-2A0A140T8N6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-2A0A140T8N6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-2A0A140T8N6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-2A0A140T8N6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-2A0A140T8N6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-2A0A140T8N6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-2A0A140T8N6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-2A0A140T8N6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Gm45444-201ENSMUST00000211394 898 ntBASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-2A0A140T8N6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms