Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.91■□□□□ 0.46
KRTAP3-3Q9BYR6 AC005786.4-201ENST00000623369 682 ntBASIC17.91■□□□□ 0.46
KRTAP3-3Q9BYR6 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
KRTAP3-3Q9BYR6 SEC63P1-201ENST00000425785 1258 ntBASIC17.86■□□□□ 0.45
KRTAP3-3Q9BYR6 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC17.83■□□□□ 0.44
KRTAP3-3Q9BYR6 EIF2S2P5-201ENST00000457635 968 ntBASIC17.81■□□□□ 0.44
KRTAP3-3Q9BYR6 AL603841.1-201ENST00000430516 664 ntBASIC17.8■□□□□ 0.44
KRTAP3-3Q9BYR6 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRTAP3-3Q9BYR6 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRTAP3-3Q9BYR6 AL845331.1-201ENST00000424978 1190 ntBASIC17.76■□□□□ 0.43
KRTAP3-3Q9BYR6 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC17.76■□□□□ 0.43
KRTAP3-3Q9BYR6 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC17.74■□□□□ 0.43
KRTAP3-3Q9BYR6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KRTAP3-3Q9BYR6 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC17.72■□□□□ 0.43
KRTAP3-3Q9BYR6 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC17.72■□□□□ 0.43
KRTAP3-3Q9BYR6 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC17.67■□□□□ 0.42
KRTAP3-3Q9BYR6 MIR3908-201ENST00000579798 126 ntBASIC17.67■□□□□ 0.42
KRTAP3-3Q9BYR6 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRTAP3-3Q9BYR6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC17.63■□□□□ 0.41
KRTAP3-3Q9BYR6 AC090142.2-201ENST00000483263 416 ntBASIC17.63■□□□□ 0.41
KRTAP3-3Q9BYR6 AC006518.1-201ENST00000541449 943 ntBASIC17.62■□□□□ 0.41
KRTAP3-3Q9BYR6 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC17.62■□□□□ 0.41
KRTAP3-3Q9BYR6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.61■□□□□ 0.41
KRTAP3-3Q9BYR6 AC004223.2-201ENST00000590309 544 ntBASIC17.55■□□□□ 0.4
KRTAP3-3Q9BYR6 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC17.54■□□□□ 0.4
KRTAP3-3Q9BYR6 AL158211.2-201ENST00000607282 395 ntBASIC17.53■□□□□ 0.4
KRTAP3-3Q9BYR6 Z97985.1-201ENST00000332270 946 ntBASIC17.52■□□□□ 0.4
KRTAP3-3Q9BYR6 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC17.52■□□□□ 0.4
KRTAP3-3Q9BYR6 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC17.52■□□□□ 0.4
KRTAP3-3Q9BYR6 AC103798.2-201ENST00000624292 632 ntBASIC17.5■□□□□ 0.39
KRTAP3-3Q9BYR6 AL034417.3-201ENST00000641100 1043 ntBASIC17.5■□□□□ 0.39
KRTAP3-3Q9BYR6 EIF2S2P3-201ENST00000428356 999 ntBASIC17.49■□□□□ 0.39
KRTAP3-3Q9BYR6 AL078595.1-201ENST00000404458 226 ntBASIC17.48■□□□□ 0.39
KRTAP3-3Q9BYR6 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRTAP3-3Q9BYR6 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KRTAP3-3Q9BYR6 PSAT1P2-201ENST00000426107 972 ntBASIC17.46■□□□□ 0.39
KRTAP3-3Q9BYR6 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC17.46■□□□□ 0.39
KRTAP3-3Q9BYR6 ARL4AP4-201ENST00000434170 518 ntBASIC17.45■□□□□ 0.38
KRTAP3-3Q9BYR6 AL391001.1-201ENST00000602747 715 ntBASIC17.45■□□□□ 0.38
KRTAP3-3Q9BYR6 AL451064.1-201ENST00000607718 471 ntBASIC17.45■□□□□ 0.38
KRTAP3-3Q9BYR6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRTAP3-3Q9BYR6 AC016180.1-201ENST00000567945 403 ntBASIC17.44■□□□□ 0.38
KRTAP3-3Q9BYR6 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC17.43■□□□□ 0.38
KRTAP3-3Q9BYR6 AC022079.1-201ENST00000621546 602 ntBASIC17.43■□□□□ 0.38
KRTAP3-3Q9BYR6 AC091917.2-201ENST00000505002 744 ntBASIC17.42■□□□□ 0.38
KRTAP3-3Q9BYR6 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC17.4■□□□□ 0.38
KRTAP3-3Q9BYR6 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC17.38■□□□□ 0.37
KRTAP3-3Q9BYR6 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC17.37■□□□□ 0.37
KRTAP3-3Q9BYR6 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC17.36■□□□□ 0.37
KRTAP3-3Q9BYR6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.36■□□□□ 0.37
KRTAP3-3Q9BYR6 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
KRTAP3-3Q9BYR6 AL132657.2-201ENST00000564417 358 ntBASIC17.35■□□□□ 0.37
KRTAP3-3Q9BYR6 AC005972.3-201ENST00000606304 481 ntBASIC17.35■□□□□ 0.37
KRTAP3-3Q9BYR6 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
KRTAP3-3Q9BYR6 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC17.34■□□□□ 0.37
KRTAP3-3Q9BYR6 GAPDHP74-202ENST00000632456 782 ntBASIC17.33■□□□□ 0.36
KRTAP3-3Q9BYR6 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC17.32■□□□□ 0.36
KRTAP3-3Q9BYR6 AC010326.4-201ENST00000604665 891 ntBASIC17.32■□□□□ 0.36
KRTAP3-3Q9BYR6 AC022148.2-201ENST00000586176 560 ntBASIC17.31■□□□□ 0.36
KRTAP3-3Q9BYR6 AC133485.6-201ENST00000624045 688 ntBASIC17.3■□□□□ 0.36
KRTAP3-3Q9BYR6 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
KRTAP3-3Q9BYR6 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC17.29■□□□□ 0.36
KRTAP3-3Q9BYR6 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
KRTAP3-3Q9BYR6 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC17.25■□□□□ 0.35
KRTAP3-3Q9BYR6 AC020910.4-201ENST00000612269 540 ntBASIC17.25■□□□□ 0.35
KRTAP3-3Q9BYR6 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC17.24■□□□□ 0.35
KRTAP3-3Q9BYR6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.24■□□□□ 0.35
KRTAP3-3Q9BYR6 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC17.23■□□□□ 0.35
KRTAP3-3Q9BYR6 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC17.22■□□□□ 0.35
KRTAP3-3Q9BYR6 AC104629.1-201ENST00000494226 508 ntBASIC17.2■□□□□ 0.34
KRTAP3-3Q9BYR6 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC17.2■□□□□ 0.34
KRTAP3-3Q9BYR6 AC048344.4-201ENST00000619744 527 ntBASIC17.19■□□□□ 0.34
KRTAP3-3Q9BYR6 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.18■□□□□ 0.34
KRTAP3-3Q9BYR6 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC17.18■□□□□ 0.34
KRTAP3-3Q9BYR6 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC17.18■□□□□ 0.34
KRTAP3-3Q9BYR6 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC17.17■□□□□ 0.34
KRTAP3-3Q9BYR6 OR13I1P-201ENST00000609811 1264 ntBASIC17.17■□□□□ 0.34
KRTAP3-3Q9BYR6 SEPT7P7-201ENST00000420492 1301 ntBASIC17.17■□□□□ 0.34
KRTAP3-3Q9BYR6 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC17.16■□□□□ 0.34
KRTAP3-3Q9BYR6 AC009452.1-201ENST00000640823 606 ntBASIC17.16■□□□□ 0.34
KRTAP3-3Q9BYR6 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC17.15■□□□□ 0.34
KRTAP3-3Q9BYR6 AL353729.2-201ENST00000605859 1249 ntBASIC17.15■□□□□ 0.34
KRTAP3-3Q9BYR6 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC17.13■□□□□ 0.33
KRTAP3-3Q9BYR6 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC17.13■□□□□ 0.33
KRTAP3-3Q9BYR6 AL133445.2-201ENST00000611191 527 ntBASIC17.13■□□□□ 0.33
KRTAP3-3Q9BYR6 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRTAP3-3Q9BYR6 AL391262.2-201ENST00000622466 494 ntBASIC17.09■□□□□ 0.33
KRTAP3-3Q9BYR6 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRTAP3-3Q9BYR6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.08■□□□□ 0.32
KRTAP3-3Q9BYR6 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRTAP3-3Q9BYR6 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRTAP3-3Q9BYR6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRTAP3-3Q9BYR6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.04■□□□□ 0.32
KRTAP3-3Q9BYR6 AC005954.1-201ENST00000591962 337 ntTSL 3 BASIC17.04■□□□□ 0.32
KRTAP3-3Q9BYR6 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC17.03■□□□□ 0.32
KRTAP3-3Q9BYR6 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC17.03■□□□□ 0.32
KRTAP3-3Q9BYR6 ELOCP6-201ENST00000429066 328 ntBASIC17.02■□□□□ 0.32
KRTAP3-3Q9BYR6 ELOCP12-201ENST00000458706 328 ntBASIC17.02■□□□□ 0.32
KRTAP3-3Q9BYR6 RN7SKP199-201ENST00000410325 305 ntBASIC17.01■□□□□ 0.31
KRTAP3-3Q9BYR6 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms