Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.77■■■□□ 2.68
Ddx41Q91VN6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Ddx41Q91VN6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.74■■■□□ 2.67
Ddx41Q91VN6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Ddx41Q91VN6 Gm8109-201ENSMUST00000194076 746 ntBASIC31.74■■■□□ 2.67
Ddx41Q91VN6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Ddx41Q91VN6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.7■■■□□ 2.67
Ddx41Q91VN6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.65■■■□□ 2.66
Ddx41Q91VN6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ddx41Q91VN6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.53■■■□□ 2.64
Ddx41Q91VN6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ddx41Q91VN6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ddx41Q91VN6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Ddx41Q91VN6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.51■■■□□ 2.63
Ddx41Q91VN6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.5■■■□□ 2.63
Ddx41Q91VN6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
Ddx41Q91VN6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ddx41Q91VN6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ddx41Q91VN6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ddx41Q91VN6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Ddx41Q91VN6 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.34■■■□□ 2.61
Ddx41Q91VN6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ddx41Q91VN6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.17■■■□□ 2.58
Ddx41Q91VN6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ddx41Q91VN6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ddx41Q91VN6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ddx41Q91VN6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
Ddx41Q91VN6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
Ddx41Q91VN6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
Ddx41Q91VN6 Gm27322-201ENSMUST00000184007 104 ntBASIC31.09■■■□□ 2.57
Ddx41Q91VN6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Ddx41Q91VN6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Ddx41Q91VN6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
Ddx41Q91VN6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.98■■■□□ 2.55
Ddx41Q91VN6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ddx41Q91VN6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ddx41Q91VN6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Ddx41Q91VN6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Ddx41Q91VN6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Ddx41Q91VN6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.79■■■□□ 2.52
Ddx41Q91VN6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ddx41Q91VN6 Gm24804-201ENSMUST00000174982 85 ntBASIC30.77■■■□□ 2.52
Ddx41Q91VN6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Ddx41Q91VN6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ddx41Q91VN6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ddx41Q91VN6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
Ddx41Q91VN6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.73■■■□□ 2.51
Ddx41Q91VN6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
Ddx41Q91VN6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ddx41Q91VN6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.68■■■□□ 2.5
Ddx41Q91VN6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ddx41Q91VN6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ddx41Q91VN6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ddx41Q91VN6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ddx41Q91VN6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Ddx41Q91VN6 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.53■■■□□ 2.48
Ddx41Q91VN6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Ddx41Q91VN6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Ddx41Q91VN6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Ddx41Q91VN6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.5■■■□□ 2.47
Ddx41Q91VN6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ddx41Q91VN6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ddx41Q91VN6 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.47■■■□□ 2.47
Ddx41Q91VN6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ddx41Q91VN6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ddx41Q91VN6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ddx41Q91VN6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
Ddx41Q91VN6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ddx41Q91VN6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ddx41Q91VN6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ddx41Q91VN6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Ddx41Q91VN6 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.34■■■□□ 2.45
Ddx41Q91VN6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Ddx41Q91VN6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
Ddx41Q91VN6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ddx41Q91VN6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ddx41Q91VN6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.24■■■□□ 2.43
Ddx41Q91VN6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Ddx41Q91VN6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ddx41Q91VN6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.21■■■□□ 2.43
Ddx41Q91VN6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Ddx41Q91VN6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Ddx41Q91VN6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.19■■■□□ 2.42
Ddx41Q91VN6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ddx41Q91VN6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Ddx41Q91VN6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.16■■■□□ 2.42
Ddx41Q91VN6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Ddx41Q91VN6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
Ddx41Q91VN6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ddx41Q91VN6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.1■■■□□ 2.41
Ddx41Q91VN6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ddx41Q91VN6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ddx41Q91VN6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Ddx41Q91VN6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Ddx41Q91VN6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ddx41Q91VN6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ddx41Q91VN6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ddx41Q91VN6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ddx41Q91VN6 Zfp131-205ENSMUST00000223812 663 ntBASIC29.96■■■□□ 2.39
Ddx41Q91VN6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms