Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
Zcchc9Q8R1J3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Zcchc9Q8R1J3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Zcchc9Q8R1J3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Zcchc9Q8R1J3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Zcchc9Q8R1J3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
Zcchc9Q8R1J3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.57■■■□□ 2
Zcchc9Q8R1J3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.56■■■□□ 2
Zcchc9Q8R1J3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Zcchc9Q8R1J3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Zcchc9Q8R1J3 Gm27322-201ENSMUST00000184007 104 ntBASIC27.54■■■□□ 2
Zcchc9Q8R1J3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.54■■■□□ 2
Zcchc9Q8R1J3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Zcchc9Q8R1J3 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.49■■□□□ 1.99
Zcchc9Q8R1J3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Zcchc9Q8R1J3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
Zcchc9Q8R1J3 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.44■■□□□ 1.98
Zcchc9Q8R1J3 Gm24804-201ENSMUST00000174982 85 ntBASIC27.42■■□□□ 1.98
Zcchc9Q8R1J3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Zcchc9Q8R1J3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Zcchc9Q8R1J3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.4■■□□□ 1.98
Zcchc9Q8R1J3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Zcchc9Q8R1J3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Zcchc9Q8R1J3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Zcchc9Q8R1J3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Zcchc9Q8R1J3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.3■■□□□ 1.96
Zcchc9Q8R1J3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Zcchc9Q8R1J3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.23■■□□□ 1.95
Zcchc9Q8R1J3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Zcchc9Q8R1J3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Zcchc9Q8R1J3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Zcchc9Q8R1J3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Zcchc9Q8R1J3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.11■■□□□ 1.93
Zcchc9Q8R1J3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Zcchc9Q8R1J3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Zcchc9Q8R1J3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Zcchc9Q8R1J3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.01■■□□□ 1.91
Zcchc9Q8R1J3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Zcchc9Q8R1J3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Zcchc9Q8R1J3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.95■■□□□ 1.91
Zcchc9Q8R1J3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
Zcchc9Q8R1J3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Zcchc9Q8R1J3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Zcchc9Q8R1J3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Zcchc9Q8R1J3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Zcchc9Q8R1J3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Zcchc9Q8R1J3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Zcchc9Q8R1J3 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.87■■□□□ 1.89
Zcchc9Q8R1J3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Zcchc9Q8R1J3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Zcchc9Q8R1J3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.86■■□□□ 1.89
Zcchc9Q8R1J3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Zcchc9Q8R1J3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Zcchc9Q8R1J3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
Zcchc9Q8R1J3 Zfp131-205ENSMUST00000223812 663 ntBASIC26.82■■□□□ 1.88
Zcchc9Q8R1J3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Zcchc9Q8R1J3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Zcchc9Q8R1J3 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.81■■□□□ 1.88
Zcchc9Q8R1J3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Zcchc9Q8R1J3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Zcchc9Q8R1J3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Zcchc9Q8R1J3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Zcchc9Q8R1J3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.7■■□□□ 1.87
Zcchc9Q8R1J3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Zcchc9Q8R1J3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Zcchc9Q8R1J3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Zcchc9Q8R1J3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Zcchc9Q8R1J3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.65■■□□□ 1.86
Zcchc9Q8R1J3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
Zcchc9Q8R1J3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Zcchc9Q8R1J3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Zcchc9Q8R1J3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Zcchc9Q8R1J3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Zcchc9Q8R1J3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.52■■□□□ 1.84
Zcchc9Q8R1J3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Zcchc9Q8R1J3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Zcchc9Q8R1J3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Zcchc9Q8R1J3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Zcchc9Q8R1J3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Zcchc9Q8R1J3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Zcchc9Q8R1J3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Zcchc9Q8R1J3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Zcchc9Q8R1J3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Zcchc9Q8R1J3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Zcchc9Q8R1J3 Gm16148-201ENSMUST00000119653 893 ntBASIC26.38■■□□□ 1.81
Zcchc9Q8R1J3 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.36■■□□□ 1.81
Zcchc9Q8R1J3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.36■■□□□ 1.81
Zcchc9Q8R1J3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Zcchc9Q8R1J3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Zcchc9Q8R1J3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Zcchc9Q8R1J3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Zcchc9Q8R1J3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Zcchc9Q8R1J3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Zcchc9Q8R1J3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Zcchc9Q8R1J3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Zcchc9Q8R1J3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Zcchc9Q8R1J3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Zcchc9Q8R1J3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Zcchc9Q8R1J3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Zcchc9Q8R1J3 Peli2-204ENSMUST00000226513 1320 ntBASIC26.2■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms