Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Gm25239-201ENSMUST00000174915 86 ntBASIC38.37■■■■□ 3.73
Zcchc9Q8R1J3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
Zcchc9Q8R1J3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Zcchc9Q8R1J3 Gm24109-201ENSMUST00000175489 103 ntBASIC33.36■■■□□ 2.93
Zcchc9Q8R1J3 Gm15042-201ENSMUST00000120212 883 ntBASIC33.34■■■□□ 2.93
Zcchc9Q8R1J3 Gm15045-201ENSMUST00000117359 883 ntBASIC32.53■■■□□ 2.8
Zcchc9Q8R1J3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Zcchc9Q8R1J3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Zcchc9Q8R1J3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Zcchc9Q8R1J3 Gm23366-201ENSMUST00000175022 89 ntBASIC32.02■■■□□ 2.72
Zcchc9Q8R1J3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Zcchc9Q8R1J3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Zcchc9Q8R1J3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Zcchc9Q8R1J3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.19■■■□□ 2.58
Zcchc9Q8R1J3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Zcchc9Q8R1J3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.94■■■□□ 2.54
Zcchc9Q8R1J3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.9■■■□□ 2.54
Zcchc9Q8R1J3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
Zcchc9Q8R1J3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Zcchc9Q8R1J3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
Zcchc9Q8R1J3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Zcchc9Q8R1J3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Zcchc9Q8R1J3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Zcchc9Q8R1J3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Zcchc9Q8R1J3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Zcchc9Q8R1J3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.36■■■□□ 2.45
Zcchc9Q8R1J3 Gm25238-201ENSMUST00000174914 89 ntBASIC30.33■■■□□ 2.45
Zcchc9Q8R1J3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.3■■■□□ 2.44
Zcchc9Q8R1J3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Zcchc9Q8R1J3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Zcchc9Q8R1J3 Psd-208ENSMUST00000224556 2034 ntBASIC30.16■■■□□ 2.42
Zcchc9Q8R1J3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Zcchc9Q8R1J3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Zcchc9Q8R1J3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.4
Zcchc9Q8R1J3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Zcchc9Q8R1J3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.73■■■□□ 2.35
Zcchc9Q8R1J3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.71■■■□□ 2.35
Zcchc9Q8R1J3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Zcchc9Q8R1J3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Zcchc9Q8R1J3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.47■■■□□ 2.31
Zcchc9Q8R1J3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Zcchc9Q8R1J3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Zcchc9Q8R1J3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
Zcchc9Q8R1J3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.33■■■□□ 2.29
Zcchc9Q8R1J3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Zcchc9Q8R1J3 Gm25262-201ENSMUST00000174934 133 ntBASIC29.19■■■□□ 2.26
Zcchc9Q8R1J3 Gm27325-201ENSMUST00000175467 74 ntBASIC29.14■■■□□ 2.26
Zcchc9Q8R1J3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.13■■■□□ 2.25
Zcchc9Q8R1J3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.08■■■□□ 2.25
Zcchc9Q8R1J3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Zcchc9Q8R1J3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Zcchc9Q8R1J3 Rab21-202ENSMUST00000218831 843 ntBASIC28.77■■■□□ 2.2
Zcchc9Q8R1J3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Zcchc9Q8R1J3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.72■■■□□ 2.19
Zcchc9Q8R1J3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.71■■■□□ 2.19
Zcchc9Q8R1J3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Zcchc9Q8R1J3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.69■■■□□ 2.18
Zcchc9Q8R1J3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Zcchc9Q8R1J3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
Zcchc9Q8R1J3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.6■■■□□ 2.17
Zcchc9Q8R1J3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Zcchc9Q8R1J3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Zcchc9Q8R1J3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Zcchc9Q8R1J3 Gm26115-201ENSMUST00000175605 87 ntBASIC28.54■■■□□ 2.16
Zcchc9Q8R1J3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.54■■■□□ 2.16
Zcchc9Q8R1J3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Zcchc9Q8R1J3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Zcchc9Q8R1J3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Zcchc9Q8R1J3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.39■■■□□ 2.14
Zcchc9Q8R1J3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.38■■■□□ 2.13
Zcchc9Q8R1J3 Gm8109-201ENSMUST00000194076 746 ntBASIC28.38■■■□□ 2.13
Zcchc9Q8R1J3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.38■■■□□ 2.13
Zcchc9Q8R1J3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Zcchc9Q8R1J3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Zcchc9Q8R1J3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Zcchc9Q8R1J3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Zcchc9Q8R1J3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Zcchc9Q8R1J3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Zcchc9Q8R1J3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Zcchc9Q8R1J3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Zcchc9Q8R1J3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.2■■■□□ 2.11
Zcchc9Q8R1J3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Zcchc9Q8R1J3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Zcchc9Q8R1J3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.16■■■□□ 2.1
Zcchc9Q8R1J3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Zcchc9Q8R1J3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.11■■■□□ 2.09
Zcchc9Q8R1J3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Zcchc9Q8R1J3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Zcchc9Q8R1J3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Zcchc9Q8R1J3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
Zcchc9Q8R1J3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Zcchc9Q8R1J3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Zcchc9Q8R1J3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Zcchc9Q8R1J3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.85■■■□□ 2.05
Zcchc9Q8R1J3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.8■■■□□ 2.04
Zcchc9Q8R1J3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Zcchc9Q8R1J3 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.78■■■□□ 2.04
Zcchc9Q8R1J3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Zcchc9Q8R1J3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Zcchc9Q8R1J3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.71■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms