Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC38.18■■■■□ 3.7
Ddx54Q8K4L0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC38.14■■■■□ 3.7
Ddx54Q8K4L0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC38.12■■■■□ 3.69
Ddx54Q8K4L0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC38.06■■■■□ 3.68
Ddx54Q8K4L0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC38.04■■■■□ 3.68
Ddx54Q8K4L0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
Ddx54Q8K4L0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
Ddx54Q8K4L0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
Ddx54Q8K4L0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC37.98■■■■□ 3.67
Ddx54Q8K4L0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC37.96■■■■□ 3.67
Ddx54Q8K4L0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC37.95■■■■□ 3.67
Ddx54Q8K4L0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
Ddx54Q8K4L0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC37.82■■■■□ 3.65
Ddx54Q8K4L0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
Ddx54Q8K4L0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
Ddx54Q8K4L0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC37.79■■■■□ 3.64
Ddx54Q8K4L0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC37.75■■■■□ 3.63
Ddx54Q8K4L0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC37.75■■■■□ 3.63
Ddx54Q8K4L0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
Ddx54Q8K4L0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC37.64■■■■□ 3.62
Ddx54Q8K4L0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
Ddx54Q8K4L0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
Ddx54Q8K4L0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC37.58■■■■□ 3.61
Ddx54Q8K4L0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC37.57■■■■□ 3.61
Ddx54Q8K4L0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.6
Ddx54Q8K4L0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
Ddx54Q8K4L0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC37.48■■■■□ 3.59
Ddx54Q8K4L0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC37.48■■■■□ 3.59
Ddx54Q8K4L0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC37.45■■■■□ 3.59
Ddx54Q8K4L0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC37.45■■■■□ 3.59
Ddx54Q8K4L0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
Ddx54Q8K4L0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
Ddx54Q8K4L0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC37.34■■■■□ 3.57
Ddx54Q8K4L0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
Ddx54Q8K4L0 AC166822.3-201ENSMUST00000227394 661 ntBASIC37.31■■■■□ 3.56
Ddx54Q8K4L0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC37.3■■■■□ 3.56
Ddx54Q8K4L0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
Ddx54Q8K4L0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC37.19■■■■□ 3.54
Ddx54Q8K4L0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
Ddx54Q8K4L0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC37.16■■■■□ 3.54
Ddx54Q8K4L0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC37.12■■■■□ 3.53
Ddx54Q8K4L0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC37.11■■■■□ 3.53
Ddx54Q8K4L0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC37.08■■■■□ 3.53
Ddx54Q8K4L0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC37.05■■■■□ 3.52
Ddx54Q8K4L0 Gm16148-201ENSMUST00000119653 893 ntBASIC37.04■■■■□ 3.52
Ddx54Q8K4L0 Tdp2-203ENSMUST00000223804 1136 ntBASIC37■■■■□ 3.51
Ddx54Q8K4L0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Ddx54Q8K4L0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
Ddx54Q8K4L0 Gm42596-201ENSMUST00000196305 1958 ntBASIC36.94■■■■□ 3.5
Ddx54Q8K4L0 AL845457.1-201ENSMUST00000197244 68 ntBASIC36.93■■■■□ 3.5
Ddx54Q8K4L0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC36.91■■■■□ 3.5
Ddx54Q8K4L0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC36.91■■■■□ 3.5
Ddx54Q8K4L0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC36.89■■■■□ 3.5
Ddx54Q8K4L0 Gm10524-201ENSMUST00000181931 1893 ntBASIC36.88■■■■□ 3.49
Ddx54Q8K4L0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC36.87■■■■□ 3.49
Ddx54Q8K4L0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC36.87■■■■□ 3.49
Ddx54Q8K4L0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
Ddx54Q8K4L0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC36.85■■■■□ 3.49
Ddx54Q8K4L0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
Ddx54Q8K4L0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC36.8■■■■□ 3.48
Ddx54Q8K4L0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Ddx54Q8K4L0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
Ddx54Q8K4L0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC36.77■■■■□ 3.48
Ddx54Q8K4L0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC36.76■■■■□ 3.47
Ddx54Q8K4L0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
Ddx54Q8K4L0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC36.74■■■■□ 3.47
Ddx54Q8K4L0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC36.74■■■■□ 3.47
Ddx54Q8K4L0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC36.73■■■■□ 3.47
Ddx54Q8K4L0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC36.73■■■■□ 3.47
Ddx54Q8K4L0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC36.69■■■■□ 3.46
Ddx54Q8K4L0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC36.68■■■■□ 3.46
Ddx54Q8K4L0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
Ddx54Q8K4L0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC36.66■■■■□ 3.46
Ddx54Q8K4L0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC36.62■■■■□ 3.45
Ddx54Q8K4L0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC36.6■■■■□ 3.45
Ddx54Q8K4L0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC36.59■■■■□ 3.45
Ddx54Q8K4L0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
Ddx54Q8K4L0 Gm45855-201ENSMUST00000212546 880 ntBASIC36.58■■■■□ 3.45
Ddx54Q8K4L0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC36.55■■■■□ 3.44
Ddx54Q8K4L0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC36.55■■■■□ 3.44
Ddx54Q8K4L0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
Ddx54Q8K4L0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC36.51■■■■□ 3.43
Ddx54Q8K4L0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
Ddx54Q8K4L0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
Ddx54Q8K4L0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC36.46■■■■□ 3.43
Ddx54Q8K4L0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Ddx54Q8K4L0 Peli2-204ENSMUST00000226513 1320 ntBASIC36.43■■■■□ 3.42
Ddx54Q8K4L0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC36.41■■■■□ 3.42
Ddx54Q8K4L0 Gm5987-201ENSMUST00000196433 1151 ntBASIC36.4■■■■□ 3.42
Ddx54Q8K4L0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
Ddx54Q8K4L0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC36.36■■■■□ 3.41
Ddx54Q8K4L0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC36.35■■■■□ 3.41
Ddx54Q8K4L0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
Ddx54Q8K4L0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
Ddx54Q8K4L0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC36.3■■■■□ 3.4
Ddx54Q8K4L0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC36.29■■■■□ 3.4
Ddx54Q8K4L0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
Ddx54Q8K4L0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC36.24■■■■□ 3.39
Ddx54Q8K4L0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
Ddx54Q8K4L0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC36.2■■■■□ 3.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms