Protein–RNA interactions for Protein: Q8K441

Abca6, ATP-binding cassette sub-family A member 6, mousemouse

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca6Q8K441 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC41.9■■■■■ 4.3
Abca6Q8K441 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC41.9■■■■■ 4.3
Abca6Q8K441 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC41.86■■■■■ 4.29
Abca6Q8K441 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC41.84■■■■■ 4.29
Abca6Q8K441 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC41.81■■■■■ 4.28
Abca6Q8K441 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC41.81■■■■■ 4.28
Abca6Q8K441 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC41.77■■■■■ 4.28
Abca6Q8K441 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC41.64■■■■■ 4.26
Abca6Q8K441 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC41.64■■■■■ 4.26
Abca6Q8K441 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC41.62■■■■■ 4.25
Abca6Q8K441 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC41.58■■■■■ 4.25
Abca6Q8K441 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC41.58■■■■■ 4.25
Abca6Q8K441 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC41.45■■■■■ 4.23
Abca6Q8K441 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC41.44■■■■■ 4.22
Abca6Q8K441 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC41.43■■■■■ 4.22
Abca6Q8K441 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC41.39■■■■■ 4.22
Abca6Q8K441 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC41.37■■■■■ 4.21
Abca6Q8K441 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC41.36■■■■■ 4.21
Abca6Q8K441 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC41.33■■■■■ 4.21
Abca6Q8K441 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC41.29■■■■■ 4.2
Abca6Q8K441 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC41.26■■■■■ 4.2
Abca6Q8K441 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC41.26■■■■■ 4.2
Abca6Q8K441 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC41.22■■■■■ 4.19
Abca6Q8K441 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC41.22■■■■■ 4.19
Abca6Q8K441 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC41.18■■■■■ 4.18
Abca6Q8K441 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC41.15■■■■■ 4.18
Abca6Q8K441 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC41.13■■■■■ 4.18
Abca6Q8K441 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC41.12■■■■■ 4.17
Abca6Q8K441 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC41.1■■■■■ 4.17
Abca6Q8K441 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC41.07■■■■■ 4.16
Abca6Q8K441 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC41.06■■■■■ 4.16
Abca6Q8K441 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC41.06■■■■■ 4.16
Abca6Q8K441 Gm42596-201ENSMUST00000196305 1958 ntBASIC41.03■■■■■ 4.16
Abca6Q8K441 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC40.99■■■■■ 4.15
Abca6Q8K441 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC40.97■■■■■ 4.15
Abca6Q8K441 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC40.95■■■■■ 4.15
Abca6Q8K441 Gm10524-201ENSMUST00000181931 1893 ntBASIC40.91■■■■■ 4.14
Abca6Q8K441 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC40.9■■■■■ 4.14
Abca6Q8K441 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC40.87■■■■■ 4.13
Abca6Q8K441 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC40.87■■■■■ 4.13
Abca6Q8K441 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC40.86■■■■■ 4.13
Abca6Q8K441 AC166822.3-201ENSMUST00000227394 661 ntBASIC40.82■■■■■ 4.12
Abca6Q8K441 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC40.78■■■■■ 4.12
Abca6Q8K441 CT025624.2-201ENSMUST00000223609 1909 ntBASIC40.78■■■■■ 4.12
Abca6Q8K441 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC40.77■■■■■ 4.12
Abca6Q8K441 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC40.72■■■■■ 4.11
Abca6Q8K441 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC40.71■■■■■ 4.11
Abca6Q8K441 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC40.66■■■■■ 4.1
Abca6Q8K441 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC40.66■■■■■ 4.1
Abca6Q8K441 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC40.64■■■■■ 4.1
Abca6Q8K441 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
Abca6Q8K441 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC40.49■■■■■ 4.07
Abca6Q8K441 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC40.49■■■■■ 4.07
Abca6Q8K441 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC40.45■■■■■ 4.07
Abca6Q8K441 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC40.43■■■■■ 4.06
Abca6Q8K441 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC40.4■■■■■ 4.06
Abca6Q8K441 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC40.39■■■■■ 4.06
Abca6Q8K441 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC40.37■■■■■ 4.05
Abca6Q8K441 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC40.36■■■■■ 4.05
Abca6Q8K441 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC40.36■■■■■ 4.05
Abca6Q8K441 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC40.35■■■■■ 4.05
Abca6Q8K441 AL845457.1-201ENSMUST00000197244 68 ntBASIC40.34■■■■■ 4.05
Abca6Q8K441 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC40.33■■■■■ 4.05
Abca6Q8K441 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC40.28■■■■■ 4.04
Abca6Q8K441 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC40.28■■■■■ 4.04
Abca6Q8K441 Gm16148-201ENSMUST00000119653 893 ntBASIC40.28■■■■■ 4.04
Abca6Q8K441 Tdp2-203ENSMUST00000223804 1136 ntBASIC40.25■■■■■ 4.03
Abca6Q8K441 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC40.24■■■■■ 4.03
Abca6Q8K441 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC40.21■■■■■ 4.03
Abca6Q8K441 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC40.2■■■■■ 4.03
Abca6Q8K441 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC40.19■■■■■ 4.02
Abca6Q8K441 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC40.16■■■■■ 4.02
Abca6Q8K441 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC40.16■■■■■ 4.02
Abca6Q8K441 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC40.14■■■■■ 4.02
Abca6Q8K441 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC40.14■■■■■ 4.02
Abca6Q8K441 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC40.11■■■■■ 4.01
Abca6Q8K441 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC40.09■■■■■ 4.01
Abca6Q8K441 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC40.08■■■■■ 4.01
Abca6Q8K441 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC40.02■■■■■ 4
Abca6Q8K441 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC40.02■■■■■ 4
Abca6Q8K441 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC39.94■■■■□ 3.98
Abca6Q8K441 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC39.87■■■■□ 3.97
Abca6Q8K441 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC39.86■■■■□ 3.97
Abca6Q8K441 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC39.83■■■■□ 3.97
Abca6Q8K441 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC39.83■■■■□ 3.97
Abca6Q8K441 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC39.82■■■■□ 3.96
Abca6Q8K441 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC39.81■■■■□ 3.96
Abca6Q8K441 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC39.81■■■■□ 3.96
Abca6Q8K441 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
Abca6Q8K441 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
Abca6Q8K441 Gm45855-201ENSMUST00000212546 880 ntBASIC39.76■■■■□ 3.96
Abca6Q8K441 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC39.76■■■■□ 3.95
Abca6Q8K441 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC39.75■■■■□ 3.95
Abca6Q8K441 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
Abca6Q8K441 Peli2-204ENSMUST00000226513 1320 ntBASIC39.73■■■■□ 3.95
Abca6Q8K441 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC39.72■■■■□ 3.95
Abca6Q8K441 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC39.71■■■■□ 3.95
Abca6Q8K441 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC39.7■■■■□ 3.95
Abca6Q8K441 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC39.69■■■■□ 3.94
Abca6Q8K441 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC39.69■■■■□ 3.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms