Protein–RNA interactions for Protein: Q8BVL3

Snx17, Sorting nexin-17, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx17Q8BVL3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
Snx17Q8BVL3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Snx17Q8BVL3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.76■■■□□ 2.67
Snx17Q8BVL3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Snx17Q8BVL3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Snx17Q8BVL3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Snx17Q8BVL3 Zfp131-205ENSMUST00000223812 663 ntBASIC31.68■■■□□ 2.66
Snx17Q8BVL3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Snx17Q8BVL3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Snx17Q8BVL3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Snx17Q8BVL3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Snx17Q8BVL3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Snx17Q8BVL3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Snx17Q8BVL3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Snx17Q8BVL3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.46■■■□□ 2.63
Snx17Q8BVL3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Snx17Q8BVL3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Snx17Q8BVL3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Snx17Q8BVL3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Snx17Q8BVL3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.41■■■□□ 2.62
Snx17Q8BVL3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Snx17Q8BVL3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Snx17Q8BVL3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Snx17Q8BVL3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.33■■■□□ 2.61
Snx17Q8BVL3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.31■■■□□ 2.6
Snx17Q8BVL3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Snx17Q8BVL3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Snx17Q8BVL3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Snx17Q8BVL3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Snx17Q8BVL3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Snx17Q8BVL3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Snx17Q8BVL3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Snx17Q8BVL3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Snx17Q8BVL3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Snx17Q8BVL3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.15■■■□□ 2.58
Snx17Q8BVL3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
Snx17Q8BVL3 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.13■■■□□ 2.57
Snx17Q8BVL3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Snx17Q8BVL3 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.1■■■□□ 2.57
Snx17Q8BVL3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Snx17Q8BVL3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Snx17Q8BVL3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
Snx17Q8BVL3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
Snx17Q8BVL3 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.99■■■□□ 2.55
Snx17Q8BVL3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Snx17Q8BVL3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Snx17Q8BVL3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.92■■■□□ 2.54
Snx17Q8BVL3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Snx17Q8BVL3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
Snx17Q8BVL3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Snx17Q8BVL3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Snx17Q8BVL3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.81■■■□□ 2.52
Snx17Q8BVL3 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.8■■■□□ 2.52
Snx17Q8BVL3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
Snx17Q8BVL3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Snx17Q8BVL3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Snx17Q8BVL3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Snx17Q8BVL3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Snx17Q8BVL3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Snx17Q8BVL3 Gm16148-201ENSMUST00000119653 893 ntBASIC30.7■■■□□ 2.51
Snx17Q8BVL3 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.68■■■□□ 2.5
Snx17Q8BVL3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.67■■■□□ 2.5
Snx17Q8BVL3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.66■■■□□ 2.5
Snx17Q8BVL3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
Snx17Q8BVL3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Snx17Q8BVL3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Snx17Q8BVL3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.61■■■□□ 2.49
Snx17Q8BVL3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Snx17Q8BVL3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.59■■■□□ 2.49
Snx17Q8BVL3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Snx17Q8BVL3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Snx17Q8BVL3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.54■■■□□ 2.48
Snx17Q8BVL3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Snx17Q8BVL3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Snx17Q8BVL3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Snx17Q8BVL3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Snx17Q8BVL3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
Snx17Q8BVL3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Snx17Q8BVL3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Snx17Q8BVL3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.4■■■□□ 2.46
Snx17Q8BVL3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.39■■■□□ 2.46
Snx17Q8BVL3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
Snx17Q8BVL3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.37■■■□□ 2.45
Snx17Q8BVL3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Snx17Q8BVL3 Peli2-204ENSMUST00000226513 1320 ntBASIC30.36■■■□□ 2.45
Snx17Q8BVL3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Snx17Q8BVL3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.33■■■□□ 2.45
Snx17Q8BVL3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Snx17Q8BVL3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
Snx17Q8BVL3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Snx17Q8BVL3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.26■■■□□ 2.43
Snx17Q8BVL3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.24■■■□□ 2.43
Snx17Q8BVL3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Snx17Q8BVL3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Snx17Q8BVL3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Snx17Q8BVL3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Snx17Q8BVL3 Gm45855-201ENSMUST00000212546 880 ntBASIC30.22■■■□□ 2.43
Snx17Q8BVL3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Snx17Q8BVL3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Snx17Q8BVL3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms