Protein–RNA interactions for Protein: Q6P4U0

Thsd7b, Thrombospondin type-1 domain-containing protein 7B, mousemouse

Predictions only

Length 1,607 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thsd7bQ6P4U0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33.67■■■□□ 2.98
Thsd7bQ6P4U0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.64■■■□□ 2.98
Thsd7bQ6P4U0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.64■■■□□ 2.98
Thsd7bQ6P4U0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Thsd7bQ6P4U0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC33.57■■■□□ 2.97
Thsd7bQ6P4U0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Thsd7bQ6P4U0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.55■■■□□ 2.96
Thsd7bQ6P4U0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC33.52■■■□□ 2.96
Thsd7bQ6P4U0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
Thsd7bQ6P4U0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
Thsd7bQ6P4U0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.41■■■□□ 2.94
Thsd7bQ6P4U0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Thsd7bQ6P4U0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
Thsd7bQ6P4U0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC33.26■■■□□ 2.91
Thsd7bQ6P4U0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.91
Thsd7bQ6P4U0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Thsd7bQ6P4U0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
Thsd7bQ6P4U0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Thsd7bQ6P4U0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Thsd7bQ6P4U0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Thsd7bQ6P4U0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC33.15■■■□□ 2.9
Thsd7bQ6P4U0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC33.13■■■□□ 2.89
Thsd7bQ6P4U0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Thsd7bQ6P4U0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Thsd7bQ6P4U0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Thsd7bQ6P4U0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC33.05■■■□□ 2.88
Thsd7bQ6P4U0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
Thsd7bQ6P4U0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Thsd7bQ6P4U0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Thsd7bQ6P4U0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
Thsd7bQ6P4U0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32.99■■■□□ 2.87
Thsd7bQ6P4U0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC32.99■■■□□ 2.87
Thsd7bQ6P4U0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC32.94■■■□□ 2.86
Thsd7bQ6P4U0 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.91■■■□□ 2.86
Thsd7bQ6P4U0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC32.91■■■□□ 2.86
Thsd7bQ6P4U0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.89■■■□□ 2.86
Thsd7bQ6P4U0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
Thsd7bQ6P4U0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Thsd7bQ6P4U0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Thsd7bQ6P4U0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84
Thsd7bQ6P4U0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Thsd7bQ6P4U0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC32.75■■■□□ 2.83
Thsd7bQ6P4U0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Thsd7bQ6P4U0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Thsd7bQ6P4U0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
Thsd7bQ6P4U0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC32.66■■■□□ 2.82
Thsd7bQ6P4U0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Thsd7bQ6P4U0 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.65■■■□□ 2.82
Thsd7bQ6P4U0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Thsd7bQ6P4U0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
Thsd7bQ6P4U0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Thsd7bQ6P4U0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC32.59■■■□□ 2.81
Thsd7bQ6P4U0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Thsd7bQ6P4U0 Gm16148-201ENSMUST00000119653 893 ntBASIC32.57■■■□□ 2.8
Thsd7bQ6P4U0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
Thsd7bQ6P4U0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC32.55■■■□□ 2.8
Thsd7bQ6P4U0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
Thsd7bQ6P4U0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Thsd7bQ6P4U0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Thsd7bQ6P4U0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC32.44■■■□□ 2.78
Thsd7bQ6P4U0 AL845457.1-201ENSMUST00000197244 68 ntBASIC32.43■■■□□ 2.78
Thsd7bQ6P4U0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
Thsd7bQ6P4U0 Gm5987-201ENSMUST00000196433 1151 ntBASIC32.42■■■□□ 2.78
Thsd7bQ6P4U0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Thsd7bQ6P4U0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Thsd7bQ6P4U0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Thsd7bQ6P4U0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Thsd7bQ6P4U0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Thsd7bQ6P4U0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Thsd7bQ6P4U0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Thsd7bQ6P4U0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC32.33■■■□□ 2.77
Thsd7bQ6P4U0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
Thsd7bQ6P4U0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Thsd7bQ6P4U0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Thsd7bQ6P4U0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Thsd7bQ6P4U0 Gm45855-201ENSMUST00000212546 880 ntBASIC32.25■■■□□ 2.75
Thsd7bQ6P4U0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Thsd7bQ6P4U0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Thsd7bQ6P4U0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Thsd7bQ6P4U0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Thsd7bQ6P4U0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC32.2■■■□□ 2.75
Thsd7bQ6P4U0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC32.19■■■□□ 2.74
Thsd7bQ6P4U0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
Thsd7bQ6P4U0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.15■■■□□ 2.74
Thsd7bQ6P4U0 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.15■■■□□ 2.74
Thsd7bQ6P4U0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
Thsd7bQ6P4U0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Thsd7bQ6P4U0 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.08■■■□□ 2.73
Thsd7bQ6P4U0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Thsd7bQ6P4U0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Thsd7bQ6P4U0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Thsd7bQ6P4U0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Thsd7bQ6P4U0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Thsd7bQ6P4U0 Peli2-204ENSMUST00000226513 1320 ntBASIC32.01■■■□□ 2.72
Thsd7bQ6P4U0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
Thsd7bQ6P4U0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Thsd7bQ6P4U0 Gm9397-201ENSMUST00000200125 605 ntBASIC32■■■□□ 2.71
Thsd7bQ6P4U0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Thsd7bQ6P4U0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Thsd7bQ6P4U0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.97■■■□□ 2.71
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms