Protein–RNA interactions for Protein: Q08218

LDS2, Outer spore wall protein LDS2, yeastyeast

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDS2Q08218 SEC11YIR022W 504 nt9.99□□□□□ -0.81
LDS2Q08218 YKL097CYKL097C 411 nt9.99□□□□□ -0.81
LDS2Q08218 LSM3YLR438C-A 270 nt9.99□□□□□ -0.81
LDS2Q08218 SIS1YNL007C 1059 nt9.99□□□□□ -0.81
LDS2Q08218 CCT6YDR188W 1641 nt9.99□□□□□ -0.81
LDS2Q08218 GIS3YLR094C 1509 nt9.97□□□□□ -0.81
LDS2Q08218 YFL021C-AYFL021C-A 855 nt9.95□□□□□ -0.82
LDS2Q08218 SUF2tP(AGG)C 72 nt9.91□□□□□ -0.82
LDS2Q08218 SUF10tP(AGG)N 72 nt9.91□□□□□ -0.82
LDS2Q08218 HOM6YJR139C 1080 nt9.9□□□□□ -0.82
LDS2Q08218 YAL037C-BYAL037C-B 975 nt9.9□□□□□ -0.82
LDS2Q08218 PIB2YGL023C 1908 nt9.88□□□□□ -0.83
LDS2Q08218 ART5YGR068C 1761 nt9.87□□□□□ -0.83
LDS2Q08218 GFD2YCL036W 1701 nt9.87□□□□□ -0.83
LDS2Q08218 YSC84YHR016C 1407 nt9.84□□□□□ -0.83
LDS2Q08218 YHL050CYHL050C 2094 nt9.81□□□□□ -0.84
LDS2Q08218 MNP1YGL068W 585 nt9.8□□□□□ -0.84
LDS2Q08218 PET9YBL030C 957 nt9.78□□□□□ -0.84
LDS2Q08218 RTS2YOR077W 699 nt9.78□□□□□ -0.84
LDS2Q08218 RKM5YLR137W 1104 nt9.77□□□□□ -0.85
LDS2Q08218 RTF1YGL244W 1677 nt9.74□□□□□ -0.85
LDS2Q08218 RRT12YCR045C 1476 nt9.72□□□□□ -0.85
LDS2Q08218 CUE1YMR264W 612 nt9.72□□□□□ -0.85
LDS2Q08218 YCH1YGR203W 447 nt9.7□□□□□ -0.86
LDS2Q08218 YOL037CYOL037C 354 nt9.68□□□□□ -0.86
LDS2Q08218 BOP3YNL042W 1191 nt9.65□□□□□ -0.86
LDS2Q08218 TIR4YOR009W 1464 nt9.65□□□□□ -0.87
LDS2Q08218 PTK1YKL198C 1989 nt9.64□□□□□ -0.87
LDS2Q08218 UME6YDR207C 2511 nt9.64□□□□□ -0.87
LDS2Q08218 YNL195CYNL195C 786 nt9.63□□□□□ -0.87
LDS2Q08218 YMR057CYMR057C 372 nt9.6□□□□□ -0.87
LDS2Q08218 NPL3YDR432W 1245 nt9.59□□□□□ -0.87
LDS2Q08218 YIL100WYIL100W 354 nt9.59□□□□□ -0.87
LDS2Q08218 NCP1YHR042W 2076 nt9.55□□□□□ -0.88
LDS2Q08218 YJL225CYJL225C 5277 nt9.55□□□□□ -0.88
LDS2Q08218 YOR139CYOR139C 393 nt9.53□□□□□ -0.88
LDS2Q08218 YLR236CYLR236C 324 nt9.51□□□□□ -0.89
LDS2Q08218 YLR154C-GYLR154C-G 150 nt9.48□□□□□ -0.89
LDS2Q08218 RDN37-1RDN37-1 5354 nt9.47□□□□□ -0.89
LDS2Q08218 RDN37-2RDN37-2 5354 nt9.47□□□□□ -0.89
LDS2Q08218 YJL152WYJL152W 360 nt9.46□□□□□ -0.9
LDS2Q08218 YFL054CYFL054C 1941 nt9.39□□□□□ -0.91
LDS2Q08218 WHI5YOR083W 888 nt9.39□□□□□ -0.91
LDS2Q08218 YLR281CYLR281C 468 nt9.38□□□□□ -0.91
LDS2Q08218 SPT8YLR055C 1809 nt9.36□□□□□ -0.91
LDS2Q08218 YCL048W-AYCL048W-A 240 nt9.36□□□□□ -0.91
LDS2Q08218 LCB1YMR296C 1677 nt9.34□□□□□ -0.91
LDS2Q08218 BOR1YNL275W 1731 nt9.29□□□□□ -0.92
LDS2Q08218 IMP2'YIL154C 1041 nt9.28□□□□□ -0.92
LDS2Q08218 IDH1YNL037C 1083 nt9.28□□□□□ -0.92
LDS2Q08218 PUS2YGL063W 1113 nt9.24□□□□□ -0.93
LDS2Q08218 DSK2YMR276W 1122 nt9.2□□□□□ -0.94
LDS2Q08218 LYS4YDR234W 2082 nt9.19□□□□□ -0.94
LDS2Q08218 tM(CAU)CtM(CAU)C 72 nt9.19□□□□□ -0.94
LDS2Q08218 IMT4tM(CAU)E 72 nt9.19□□□□□ -0.94
LDS2Q08218 IMT3tM(CAU)J3 72 nt9.19□□□□□ -0.94
LDS2Q08218 IMT1tM(CAU)O1 72 nt9.19□□□□□ -0.94
LDS2Q08218 IMT2tM(CAU)P 72 nt9.19□□□□□ -0.94
LDS2Q08218 RRD1YIL153W 1182 nt9.18□□□□□ -0.94
LDS2Q08218 GBP2YCL011C 1284 nt9.18□□□□□ -0.94
LDS2Q08218 SWE1YJL187C 2460 nt9.17□□□□□ -0.94
LDS2Q08218 FMP52YER004W 696 nt9.14□□□□□ -0.95
LDS2Q08218 SIM1YIL123W 1431 nt9.14□□□□□ -0.95
LDS2Q08218 TCD2YKL027W 1344 nt9.13□□□□□ -0.95
LDS2Q08218 RPM1RPM1 483 nt9.13□□□□□ -0.95
LDS2Q08218 PCM1YEL058W 1674 nt9.13□□□□□ -0.95
LDS2Q08218 DED1YOR204W 1815 nt9.1□□□□□ -0.95
LDS2Q08218 HSP60YLR259C 1719 nt9.09□□□□□ -0.95
LDS2Q08218 YDR433WYDR433W 441 nt9.08□□□□□ -0.96
LDS2Q08218 FMT1YBL013W 1206 nt9.04□□□□□ -0.96
LDS2Q08218 MCH5YOR306C 1566 nt9.03□□□□□ -0.96
LDS2Q08218 BIO4YNR057C 714 nt9.03□□□□□ -0.96
LDS2Q08218 FMP45YDL222C 930 nt9.02□□□□□ -0.97
LDS2Q08218 ERV46YAL042W 1248 nt9.01□□□□□ -0.97
LDS2Q08218 YPR011CYPR011C 981 nt9□□□□□ -0.97
LDS2Q08218 SNF6YHL025W 999 nt8.99□□□□□ -0.97
LDS2Q08218 ADH2YMR303C 1047 nt8.99□□□□□ -0.97
LDS2Q08218 GLK1YCL040W 1503 nt8.99□□□□□ -0.97
LDS2Q08218 ALG12YNR030W 1656 nt8.98□□□□□ -0.97
LDS2Q08218 CWP1YKL096W 720 nt8.98□□□□□ -0.97
LDS2Q08218 YKR040CYKR040C 504 nt8.96□□□□□ -0.98
LDS2Q08218 LPX1YOR084W 1164 nt8.96□□□□□ -0.98
LDS2Q08218 MXR2YCL033C 507 nt8.96□□□□□ -0.98
LDS2Q08218 YCL042WYCL042W 360 nt8.95□□□□□ -0.98
LDS2Q08218 ERF2YLR246W 1080 nt8.94□□□□□ -0.98
LDS2Q08218 CRR1YLR213C 1269 nt8.93□□□□□ -0.98
LDS2Q08218 SOR2YDL246C 1074 nt8.92□□□□□ -0.98
LDS2Q08218 SOR1YJR159W 1074 nt8.92□□□□□ -0.98
LDS2Q08218 FUR4YBR021W 1902 nt8.92□□□□□ -0.98
LDS2Q08218 YHR056W-AYHR056W-A 435 nt8.91□□□□□ -0.98
LDS2Q08218 YIH1YCR059C 777 nt8.88□□□□□ -0.99
LDS2Q08218 YLL053CYLL053C 459 nt8.85□□□□□ -0.99
LDS2Q08218 CCA1YER168C 1641 nt8.84□□□□□ -0.99
LDS2Q08218 HEM12YDR047W 1089 nt8.84□□□□□ -0.99
LDS2Q08218 FRD1YEL047C 1413 nt8.84□□□□□ -0.99
LDS2Q08218 MIC10YCL057C-A 294 nt8.84□□□□□ -0.99
LDS2Q08218 RAX1YOR301W 1308 nt8.83□□□□□ -1
LDS2Q08218 ATF2YGR177C 1608 nt8.83□□□□□ -1
LDS2Q08218 RNQ1YCL028W 1218 nt8.82□□□□□ -1
LDS2Q08218 PRP4YPR178W 1398 nt8.81□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 47.6 ms