Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 SIS1YNL007C 1059 nt12.74□□□□□ -0.37
HRD3Q05787 MEP2YNL142W 1500 nt12.71□□□□□ -0.38
HRD3Q05787 YLR236CYLR236C 324 nt12.67□□□□□ -0.38
HRD3Q05787 DSK2YMR276W 1122 nt12.67□□□□□ -0.38
HRD3Q05787 YPR011CYPR011C 981 nt12.67□□□□□ -0.38
HRD3Q05787 YJL152WYJL152W 360 nt12.66□□□□□ -0.38
HRD3Q05787 RPP2AYOL039W 321 nt12.65□□□□□ -0.38
HRD3Q05787 TIR4YOR009W 1464 nt12.62□□□□□ -0.39
HRD3Q05787 PTP1YDL230W 1008 nt12.62□□□□□ -0.39
HRD3Q05787 IMP2'YIL154C 1041 nt12.61□□□□□ -0.39
HRD3Q05787 FMP45YDL222C 930 nt12.6□□□□□ -0.39
HRD3Q05787 YCH1YGR203W 447 nt12.6□□□□□ -0.39
HRD3Q05787 MOT3YMR070W 1473 nt12.59□□□□□ -0.39
HRD3Q05787 ART5YGR068C 1761 nt12.55□□□□□ -0.4
HRD3Q05787 DCW1YKL046C 1350 nt12.55□□□□□ -0.4
HRD3Q05787 IDH1YNL037C 1083 nt12.49□□□□□ -0.41
HRD3Q05787 GFD2YCL036W 1701 nt12.48□□□□□ -0.41
HRD3Q05787 CAC2YML102W 1407 nt12.48□□□□□ -0.41
HRD3Q05787 PET9YBL030C 957 nt12.48□□□□□ -0.41
HRD3Q05787 YMR057CYMR057C 372 nt12.44□□□□□ -0.42
HRD3Q05787 LPX1YOR084W 1164 nt12.43□□□□□ -0.42
HRD3Q05787 ERV46YAL042W 1248 nt12.4□□□□□ -0.42
HRD3Q05787 GBP2YCL011C 1284 nt12.38□□□□□ -0.43
HRD3Q05787 EMI2YDR516C 1503 nt12.37□□□□□ -0.43
HRD3Q05787 YDR433WYDR433W 441 nt12.37□□□□□ -0.43
HRD3Q05787 YCL048W-AYCL048W-A 240 nt12.35□□□□□ -0.43
HRD3Q05787 RTS2YOR077W 699 nt12.33□□□□□ -0.44
HRD3Q05787 YDL221WYDL221W 552 nt12.3□□□□□ -0.44
HRD3Q05787 IRC15YPL017C 1500 nt12.3□□□□□ -0.44
HRD3Q05787 MXR2YCL033C 507 nt12.29□□□□□ -0.44
HRD3Q05787 YKR040CYKR040C 504 nt12.27□□□□□ -0.45
HRD3Q05787 SPP1YPL138C 1062 nt12.26□□□□□ -0.45
HRD3Q05787 FPS1YLL043W 2010 nt12.26□□□□□ -0.45
HRD3Q05787 SSA4YER103W 1929 nt12.25□□□□□ -0.45
HRD3Q05787 YMR090WYMR090W 684 nt12.23□□□□□ -0.45
HRD3Q05787 TCD2YKL027W 1344 nt12.2□□□□□ -0.46
HRD3Q05787 CUE1YMR264W 612 nt12.19□□□□□ -0.46
HRD3Q05787 GIS3YLR094C 1509 nt12.19□□□□□ -0.46
HRD3Q05787 RRD1YIL153W 1182 nt12.16□□□□□ -0.46
HRD3Q05787 DED1YOR204W 1815 nt12.16□□□□□ -0.46
HRD3Q05787 MRPL8YJL063C 717 nt12.11□□□□□ -0.47
HRD3Q05787 SDH1YKL148C 1923 nt12.11□□□□□ -0.47
HRD3Q05787 YBR220CYBR220C 1683 nt12.08□□□□□ -0.48
HRD3Q05787 SCC4YER147C 1875 nt12.08□□□□□ -0.48
HRD3Q05787 RTG1YOL067C 534 nt12.06□□□□□ -0.48
HRD3Q05787 FRD1YEL047C 1413 nt12.05□□□□□ -0.48
HRD3Q05787 FMT1YBL013W 1206 nt12.03□□□□□ -0.48
HRD3Q05787 YEL076C-AYEL076C-A 651 nt12.02□□□□□ -0.49
HRD3Q05787 YEL076CYEL076C 651 nt12.02□□□□□ -0.49
HRD3Q05787 YIL100WYIL100W 354 nt12.02□□□□□ -0.49
HRD3Q05787 YLR464WYLR464W 651 nt12.02□□□□□ -0.49
HRD3Q05787 SOR2YDL246C 1074 nt11.97□□□□□ -0.49
HRD3Q05787 ADO1YJR105W 1023 nt11.97□□□□□ -0.49
HRD3Q05787 SOR1YJR159W 1074 nt11.97□□□□□ -0.49
HRD3Q05787 YCL042WYCL042W 360 nt11.96□□□□□ -0.49
HRD3Q05787 FMP52YER004W 696 nt11.93□□□□□ -0.5
HRD3Q05787 PTH1YHR189W 573 nt11.89□□□□□ -0.51
HRD3Q05787 CWP1YKL096W 720 nt11.88□□□□□ -0.51
HRD3Q05787 ADH2YMR303C 1047 nt11.86□□□□□ -0.51
HRD3Q05787 YLR235CYLR235C 399 nt11.81□□□□□ -0.52
HRD3Q05787 HUA1YGR268C 597 nt11.8□□□□□ -0.52
HRD3Q05787 PCM1YEL058W 1674 nt11.79□□□□□ -0.52
HRD3Q05787 YNL195CYNL195C 786 nt11.79□□□□□ -0.52
HRD3Q05787 YKL030WYKL030W 606 nt11.78□□□□□ -0.52
HRD3Q05787 RRT12YCR045C 1476 nt11.77□□□□□ -0.52
HRD3Q05787 YSC84YHR016C 1407 nt11.76□□□□□ -0.53
HRD3Q05787 SNF6YHL025W 999 nt11.75□□□□□ -0.53
HRD3Q05787 BDF1YLR399C 2061 nt11.74□□□□□ -0.53
HRD3Q05787 LCB1YMR296C 1677 nt11.74□□□□□ -0.53
HRD3Q05787 YHL050CYHL050C 2094 nt11.71□□□□□ -0.53
HRD3Q05787 UBX6YJL048C 1191 nt11.71□□□□□ -0.53
HRD3Q05787 DIC1YLR348C 897 nt11.7□□□□□ -0.54
HRD3Q05787 TIM23YNR017W 669 nt11.65□□□□□ -0.54
HRD3Q05787 YIH1YCR059C 777 nt11.64□□□□□ -0.55
HRD3Q05787 RNQ1YCL028W 1218 nt11.63□□□□□ -0.55
HRD3Q05787 TAT1YBR069C 1860 nt11.6□□□□□ -0.55
HRD3Q05787 YDR094WYDR094W 336 nt11.58□□□□□ -0.56
HRD3Q05787 SEC11YIR022W 504 nt11.58□□□□□ -0.56
HRD3Q05787 YLR179CYLR179C 606 nt11.58□□□□□ -0.56
HRD3Q05787 BIO4YNR057C 714 nt11.57□□□□□ -0.56
HRD3Q05787 SIM1YIL123W 1431 nt11.55□□□□□ -0.56
HRD3Q05787 YLL053CYLL053C 459 nt11.53□□□□□ -0.56
HRD3Q05787 PCH2YBR186W 1695 nt11.49□□□□□ -0.57
HRD3Q05787 tL(GAG)GtL(GAG)G 82 nt11.49□□□□□ -0.57
HRD3Q05787 WSC2YNL283C 1512 nt11.49□□□□□ -0.57
HRD3Q05787 YPR064WYPR064W 420 nt11.48□□□□□ -0.57
HRD3Q05787 AHT1YHR093W 549 nt11.46□□□□□ -0.57
HRD3Q05787 FTR1YER145C 1215 nt11.45□□□□□ -0.58
HRD3Q05787 GAL1YBR020W 1587 nt11.43□□□□□ -0.58
HRD3Q05787 TAD3YLR316C 969 nt11.43□□□□□ -0.58
HRD3Q05787 GUT2YIL155C 1950 nt11.43□□□□□ -0.58
HRD3Q05787 AQY1YPR192W 918 nt11.4□□□□□ -0.58
HRD3Q05787 TRM5YHR070W 1500 nt11.4□□□□□ -0.59
HRD3Q05787 Q0182Q0182 405 nt11.38□□□□□ -0.59
HRD3Q05787 NCP1YHR042W 2076 nt11.38□□□□□ -0.59
HRD3Q05787 ATF2YGR177C 1608 nt11.35□□□□□ -0.59
HRD3Q05787 YFR018CYFR018C 1092 nt11.35□□□□□ -0.59
HRD3Q05787 YFL015W-AYFL015W-A 318 nt11.34□□□□□ -0.59
HRD3Q05787 ERF2YLR246W 1080 nt11.34□□□□□ -0.59
HRD3Q05787 CRR1YLR213C 1269 nt11.31□□□□□ -0.6
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms